RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 IL15RAQ13261 267 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 PSMG4Q5JS54 123 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 CYP2G1PQ6ZSU1 146 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 BPIFCQ8NFQ6 507 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 PPP1R14BQ96C90 147 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 MARVELD1Q9BSK0 173 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 MGAT4CQ9UBM8 478 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 TP53TG1Q9Y2A0 90 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
SHMT2-219ENST00000555563 FNDC10F2Z333 226 aa10.09□□□□□ -0.79
SHMT2-219ENST00000555563 GOSR2O14653 212 aa10.09□□□□□ -0.79
SHMT2-219ENST00000555563 ORM2P19652 201 aa10.09□□□□□ -0.79
SHMT2-219ENST00000555563 BCAP31P51572 246 aa10.09□□□□□ -0.79
SHMT2-219ENST00000555563 RAB32Q13637 225 aa10.09□□□□□ -0.79
SHMT2-219ENST00000555563 C1orf194Q5T5A4 169 aa10.09□□□□□ -0.79
SHMT2-219ENST00000555563 OR1B1Q8NGR6 318 aa10.09□□□□□ -0.79
SHMT2-219ENST00000555563 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 SPRY2O43597 315 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 SIX6O95475 246 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 LINC00869P0C866 280 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 LYL1P12980 280 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 PVALBP20472 110 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-219ENST00000555563 SLC38A11Q08AI6 406 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 CASC10Q5T4H9 136 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 OR8I2Q8N0Y5 310 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 CSTL1Q9H114 145 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 SLC25A22Q9H936 323 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 NPVFQ9HCQ7 196 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 DOK5Q9P104 306 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 FBXL17Q9UF56 701 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 SLC45A2Q9UMX9 530 aa10.08□□□□□ -0.8
SHMT2-219ENST00000555563 FAM24AA6NFZ4 105 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 DEDDO75618 318 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 CST7O76096 145 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 CA1P00915 261 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-219ENST00000555563 SNRPD3P62318 126 aaKnown RBP10.07□□□□□ -0.8
SHMT2-219ENST00000555563 ACTL10Q5JWF8 245 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 ZFAND6Q6FIF0 208 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
SHMT2-219ENST00000555563 STHQ8IWL8 128 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 RNF183Q96D59 192 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 GGACTQ9BVM4 153 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 SCRT1Q9BWW7 348 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 SLC25A32Q9H2D1 315 aa10.07□□□□□ -0.8
SHMT2-219ENST00000555563 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-219ENST00000555563 IGSF23A1L1A6 192 aa10.06□□□□□ -0.8
SHMT2-219ENST00000555563 ZNF98A6NK75 572 aa10.06□□□□□ -0.8
SHMT2-219ENST00000555563 H3BRN7 92 aa10.06□□□□□ -0.8
SHMT2-219ENST00000555563 SOCS3O14543 225 aa10.06□□□□□ -0.8
SHMT2-219ENST00000555563 SELENOTP62341 195 aa10.06□□□□□ -0.8
SHMT2-219ENST00000555563 TMEM217Q8N7C4 229 aa10.06□□□□□ -0.8
SHMT2-219ENST00000555563 MGST2Q99735 147 aa10.06□□□□□ -0.8
SHMT2-219ENST00000555563 SEPSECSQ9HD40 501 aaKnown RBP10.06□□□□□ -0.8
SHMT2-219ENST00000555563 C4BPBP20851 252 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 PSMB3P49720 205 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 SULT1A1P50225 295 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 PLP1P60201 277 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 RAP2BP61225 183 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 ZNF546Q86UE3 836 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 TMEM252Q8N6L7 170 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 UHRF2Q96PU4 802 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 SHANK2-AS3Q9BTD1 123 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 SLC25A39Q9BZJ4 359 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-219ENST00000555563 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
SHMT2-219ENST00000555563 A0A0J9YWU9 116 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 AGPAT2O15120 278 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 SSNA1O43805 119 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 HYPMO75409 117 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 GIG44P09565 113 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-219ENST00000555563 OR5G3P0C626 314 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 S100A7P31151 101 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 GALR1P47211 349 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 H2BFSP57053 126 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 LRRC37A5PQ49AS3 106 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 STX12Q86Y82 276 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 GATAD1Q8WUU5 269 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 NMES1Q9C002 83 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 ARL6Q9H0F7 186 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
SHMT2-219ENST00000555563 AGRNO00468 2067 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 UBE2L5PA0A1B0GUS4 154 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 SPP1P10451 314 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 ID1P41134 155 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 DEFB1P60022 68 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 LINC00052Q96N35 136 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 GPR82Q96P67 336 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 RSG1Q9BU20 258 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 OR5AC2Q9NZP5 309 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 WDR83OSQ9Y284 106 aa10.03□□□□□ -0.8
SHMT2-219ENST00000555563 H0YIZ8 118 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 H3BMM0 161 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 ISLRO14498 428 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 PTTG1O95997 202 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 HLA-DRB4P13762 266 aa10.02□□□□□ -0.81
SHMT2-219ENST00000555563 CAMLGP49069 296 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms