RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 NRARPQ7Z6K4 114 aa15.03■□□□□ -0
VTI1B-205ENST00000555543 TRPT1Q86TN4 253 aaKnown RBP15.03■□□□□ -0
VTI1B-205ENST00000555543 AGRNO00468 2067 aa15.03■□□□□ -0
VTI1B-205ENST00000555543 TSC22D2O75157 780 aa15.02■□□□□ -0
VTI1B-205ENST00000555543 CA1P00915 261 aaPredicted RBP15.02■□□□□ -0
VTI1B-205ENST00000555543 TAS2R30P59541 319 aa15.02■□□□□ -0
VTI1B-205ENST00000555543 GSG1LQ6UXU4 331 aa15.02■□□□□ -0
VTI1B-205ENST00000555543 STHQ8IWL8 128 aa15.02■□□□□ -0
VTI1B-205ENST00000555543 C5orf51A6NDU8 294 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 DLK1P80370 383 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 ARL16Q0P5N6 197 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 C1orf194Q5T5A4 169 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 BPIFCQ8NFQ6 507 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 ENKURQ8TC29 256 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 PPP1R14BQ96C90 147 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 PFDN2Q9UHV9 154 aa15.01□□□□□ -0.01
VTI1B-205ENST00000555543 LSM5Q9Y4Y9 91 aaKnown RBP15.01□□□□□ -0.01
VTI1B-205ENST00000555543 PLECQ15149 4684 aaKnown RBP15.01□□□□□ -0.01
VTI1B-205ENST00000555543 K7EPK0 472 aa15□□□□□ -0.01
VTI1B-205ENST00000555543 GIG44P09565 113 aaPredicted RBP15□□□□□ -0.01
VTI1B-205ENST00000555543 ACTL10Q5JWF8 245 aa15□□□□□ -0.01
VTI1B-205ENST00000555543 C11orf1Q9H5F2 150 aa15□□□□□ -0.01
VTI1B-205ENST00000555543 CFDP00746 253 aaPredicted RBP14.99□□□□□ -0.01
VTI1B-205ENST00000555543 IL5P05113 134 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 ORM2P19652 201 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 C4BPBP20851 252 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 CYP2G1PQ6ZSU1 146 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 OR10P1Q8NGE3 313 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 IL17DQ8TAD2 202 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 C2orf50Q96LR7 162 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 FBXL17Q9UF56 701 aa14.99□□□□□ -0.01
VTI1B-205ENST00000555543 SOCS3O14543 225 aa14.98□□□□□ -0.01
VTI1B-205ENST00000555543 SNRPD3P62318 126 aaKnown RBP14.98□□□□□ -0.01
VTI1B-205ENST00000555543 OR8I2Q8N0Y5 310 aa14.98□□□□□ -0.01
VTI1B-205ENST00000555543 OR1B1Q8NGR6 318 aa14.98□□□□□ -0.01
VTI1B-205ENST00000555543 GATAD1Q8WUU5 269 aa14.98□□□□□ -0.01
VTI1B-205ENST00000555543 SLC25A32Q9H2D1 315 aa14.98□□□□□ -0.01
VTI1B-205ENST00000555543 SEPSECSQ9HD40 501 aaKnown RBP14.98□□□□□ -0.01
VTI1B-205ENST00000555543 SLC45A2Q9UMX9 530 aa14.98□□□□□ -0.01
VTI1B-205ENST00000555543 A0A1B0GVG6 124 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 ZNF98A6NK75 572 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 FNDC10F2Z333 226 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 DEFB1P60022 68 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 IL15RAQ13261 267 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 C17orf77Q96MU5 243 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 RARRES2Q99969 163 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 SLC25A22Q9H936 323 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 DOK5Q9P104 306 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 MGAT4CQ9UBM8 478 aa14.97□□□□□ -0.01
VTI1B-205ENST00000555543 L7N2F9 121 aa14.96□□□□□ -0.01
VTI1B-205ENST00000555543 VAMP2P63027 116 aa14.96□□□□□ -0.01
VTI1B-205ENST00000555543 OR11H2Q8NH07 326 aa14.96□□□□□ -0.01
VTI1B-205ENST00000555543 TMEM147Q9BVK8 224 aa14.96□□□□□ -0.01
VTI1B-205ENST00000555543 NPVFQ9HCQ7 196 aa14.96□□□□□ -0.01
VTI1B-205ENST00000555543 LINC00869P0C866 280 aa14.95□□□□□ -0.02
VTI1B-205ENST00000555543 SPP1P10451 314 aa14.95□□□□□ -0.02
VTI1B-205ENST00000555543 S100A10P60903 97 aa14.95□□□□□ -0.02
VTI1B-205ENST00000555543 SLC38A11Q08AI6 406 aa14.95□□□□□ -0.02
VTI1B-205ENST00000555543 RAB32Q13637 225 aa14.95□□□□□ -0.02
VTI1B-205ENST00000555543 SCRT1Q9BWW7 348 aa14.95□□□□□ -0.02
VTI1B-205ENST00000555543 HYDINQ4G0P3 5121 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 FAM24AA6NFZ4 105 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 H3BMM0 161 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 H3BRN7 92 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 DEDDO75618 318 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 PSMB3P49720 205 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 BCAP31P51572 246 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 CAV2P51636 162 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 SELENOTP62341 195 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 GDF5OSQ5U4N7 250 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 MORN3Q6PF18 240 aaPredicted RBP14.94□□□□□ -0.02
VTI1B-205ENST00000555543 TEPPQ6URK8 271 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 ALMS1Q8TCU4 4167 aa14.94□□□□□ -0.02
VTI1B-205ENST00000555543 LCE6AA0A183 80 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 CST7O76096 145 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 SIX6O95475 246 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 PLP1P60201 277 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 PMS2P11Q13670 270 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 LINC00052Q96N35 136 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 UHRF2Q96PU4 802 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 MARVELD1Q9BSK0 173 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 SHANK2-AS3Q9BTD1 123 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 GGACTQ9BVM4 153 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 SLC25A39Q9BZJ4 359 aaPredicted RBP14.93□□□□□ -0.02
VTI1B-205ENST00000555543 GPN1Q9HCN4 374 aaPredicted RBP14.93□□□□□ -0.02
VTI1B-205ENST00000555543 CLEC5AQ9NY25 188 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 HIGD1AQ9Y241 93 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 DNAH1Q9P2D7 4330 aa14.93□□□□□ -0.02
VTI1B-205ENST00000555543 IGSF23A1L1A6 192 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 INMT-MINDY4F8WBC2 141 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 HYPMO75409 117 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 HLA-DRB4P13762 266 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 GALR1P47211 349 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 PATE2Q6UY27 113 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 RSG1Q9BU20 258 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 HLA-DRB4X5D2U9 266 aa14.92□□□□□ -0.02
VTI1B-205ENST00000555543 ISLRO14498 428 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 GOSR2O14653 212 aa14.91□□□□□ -0.02
VTI1B-205ENST00000555543 AGPAT2O15120 278 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms