RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PRR20CP86479 221 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 PRR20DP86480 221 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 PRR20BP86481 221 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 PRR20AP86496 221 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 UNQ9165/PRO28630Q6UXU0 137 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 FAM223AQ8IWN6 122 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 USMG5Q96IX5 58 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 PPT1P50897 306 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 RAB5CP51148 216 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 SLURP1P55000 103 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 ZNF600Q6ZNG1 722 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 GBGT1Q8N5D6 347 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 ZNF491Q8N8L2 437 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 THAP8Q8NA92 274 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 OR1L4Q8NGR5 311 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 MARC2Q969Z3 335 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 TIMM9Q9Y5J7 89 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 PAGE4O60829 102 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 RANP62826 216 aaKnown RBP7.87□□□□□ -1.15
NEK9-205ENST00000555405 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
NEK9-205ENST00000555405 IGFL4Q6B9Z1 124 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 IGHV4OR15-8A0A075B7B6 117 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 A0A087WW49 117 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 ELANEP08246 267 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 EDN2P20800 178 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 TCTEX1D4Q5JR98 221 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 RABAC1Q9UI14 185 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 ZNF785A8K8V0 405 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 TSPAN9O75954 239 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 APOHP02749 345 aaPredicted RBP7.87□□□□□ -1.15
NEK9-205ENST00000555405 PFDN5Q99471 154 aa7.87□□□□□ -1.15
NEK9-205ENST00000555405 TECRQ9NZ01 308 aaKnown RBP7.87□□□□□ -1.15
NEK9-205ENST00000555405 BMPR1BO00238 502 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 GGCTO75223 188 aaKnown RBP7.86□□□□□ -1.15
NEK9-205ENST00000555405 C8orf88P0DMB2 117 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 NPPCP23582 126 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 FOXE3Q13461 319 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 ZNF674Q2M3X9 581 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 SAT2Q96F10 170 aaPredicted RBP7.86□□□□□ -1.15
NEK9-205ENST00000555405 SGK494Q96LW2 274 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 PAXXQ9BUH6 204 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 SLC25A39Q9BZJ4 359 aaPredicted RBP7.86□□□□□ -1.15
NEK9-205ENST00000555405 FNDC10F2Z333 226 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 TOMM40O96008 361 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 HBE1P02100 147 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 TAS2R45P59539 299 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 RELQ04864 619 aaPredicted RBP7.86□□□□□ -1.15
NEK9-205ENST00000555405 FAM106AQ4KMX7 169 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 C19orf54Q5BKX5 351 aa7.86□□□□□ -1.15
NEK9-205ENST00000555405 GAR1Q9NY12 217 aaKnown RBP7.86□□□□□ -1.15
NEK9-205ENST00000555405 CLPSL1A2RUU4 121 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 GUK1Q16774 197 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 PVRIGQ6DKI7 326 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 OR4F4Q96R69 305 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 METTL26Q96S19 204 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 TSPAN4O14817 238 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 SUMO1P63165 101 aaKnown RBP7.85□□□□□ -1.15
NEK9-205ENST00000555405 SPSB3Q6PJ21 355 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 PARD6GQ9BYG4 376 aaPredicted RBP7.85□□□□□ -1.15
NEK9-205ENST00000555405 ZNF98A6NK75 572 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 CLDN34H7C241 214 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 GCHFRP30047 84 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 CRIP2P52943 208 aaPredicted RBP7.85□□□□□ -1.15
NEK9-205ENST00000555405 CFHR3Q02985 330 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 C17orf77Q96MU5 243 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 OR51M1Q9H341 326 aa7.85□□□□□ -1.15
NEK9-205ENST00000555405 ELOA3CA0A087WX78 387 aaPredicted RBP7.84□□□□□ -1.15
NEK9-205ENST00000555405 HOXD3P31249 432 aaPredicted RBP7.84□□□□□ -1.15
NEK9-205ENST00000555405 YPEL3P61236 119 aaPredicted RBP7.84□□□□□ -1.15
NEK9-205ENST00000555405 ZNF343Q6P1L6 599 aa7.84□□□□□ -1.15
NEK9-205ENST00000555405 OR1N2Q8NGR9 330 aa7.84□□□□□ -1.15
NEK9-205ENST00000555405 RPUSD4Q96CM3 377 aaKnown RBP7.84□□□□□ -1.15
NEK9-205ENST00000555405 TXN2Q99757 166 aa7.84□□□□□ -1.15
NEK9-205ENST00000555405 RBFOX3A6NFN3 312 aa7.84□□□□□ -1.16
NEK9-205ENST00000555405 H3BUA1 57 aa7.84□□□□□ -1.16
NEK9-205ENST00000555405 CXorf1O96002 111 aa7.84□□□□□ -1.16
NEK9-205ENST00000555405 ATP5G3P48201 142 aa7.84□□□□□ -1.16
NEK9-205ENST00000555405 PSMB3P49720 205 aa7.84□□□□□ -1.16
NEK9-205ENST00000555405 LGALS1P09382 135 aaKnown RBP7.83□□□□□ -1.16
NEK9-205ENST00000555405 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
NEK9-205ENST00000555405 UBE2E2Q96LR5 201 aa7.83□□□□□ -1.16
NEK9-205ENST00000555405 AURKAIP1Q9NWT8 199 aaPredicted RBP7.83□□□□□ -1.16
NEK9-205ENST00000555405 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.83□□□□□ -1.16
NEK9-205ENST00000555405 NBEAP1P0C6P0 100 aa7.83□□□□□ -1.16
NEK9-205ENST00000555405 STAG3L2P0CL84 134 aa7.83□□□□□ -1.16
NEK9-205ENST00000555405 STAG3L3P0CL85 134 aa7.83□□□□□ -1.16
NEK9-205ENST00000555405 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
NEK9-205ENST00000555405 OR4F17Q8NGA8 305 aa7.83□□□□□ -1.16
NEK9-205ENST00000555405 IFNA1P01562 189 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 APOC3P02656 99 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 PF4P02776 101 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 Q8N2B8 174 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 ASCL2Q99929 193 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 SLC25A2Q9BXI2 301 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 PGPA6NDG6 321 aa7.82□□□□□ -1.16
NEK9-205ENST00000555405 C9JQL5 133 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms