RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 LGALS9O00182 355 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 NDUFA4O00483 81 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 SSNA1O43805 119 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 SSSCA1O60232 199 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 IGLV1-51P01701 117 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 P0C879 139 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 NPPCP23582 126 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 OR10J1P30954 320 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 NKX2-1P43699 371 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 RND2P52198 227 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 CD81P60033 236 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 S100A10P60903 97 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 RRAS2P62070 204 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 POLR2GP62487 172 aaKnown RBP eCLIP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 OR2F1Q13607 317 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 PMS2P11Q13670 270 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 RBMY1FQ15415 496 aaKnown RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 DEFB114Q30KQ6 69 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 NMSQ5H8A3 153 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 OR8G2PQ6IF36 304 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 BTNL8Q6UX41 500 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 GSG1LQ6UXU4 331 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 IL34Q6ZMJ4 242 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 TMEM116Q8NCL8 245 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 ZNF431Q8TF32 576 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 Q8WTZ3 238 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 NARS2Q96I59 477 aaKnown RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 SLC35E1Q96K37 410 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 OR10C1Q96KK4 312 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 GINS3Q9BRX5 216 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 PBDC1Q9BVG4 233 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 EDA2RQ9HAV5 297 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 TECRQ9NZ01 308 aaKnown RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 MRPL27Q9P0M9 148 aaKnown RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 HSPB7Q9UBY9 170 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 MLXQ9UH92 298 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 UBQLN2Q9UHD9 624 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 STRAPQ9Y3F4 350 aaKnown RBP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 PUS1Q9Y606 427 aaKnown RBP eCLIP3.5□□□□□ -1.85
ATXN3-231ENST00000554994 U3KQ87 197 aa3.5□□□□□ -1.85
ATXN3-231ENST00000554994 LOC102723971A0A1B0GUV8 181 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 OR11H12B2RN74 326 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 INMT-MINDY4F8WBC2 141 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 GOSR2O14653 212 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 CLN5O75503 358 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 DEDDO75618 318 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 SIX6O95475 246 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 RD3LP0DJH9 198 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 SLC25A4P12235 298 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 GCSHP23434 173 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 BTCP35070 178 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 PAFAH1B2P68402 229 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 ZFP69Q49AA0 526 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 PRSS54Q6PEW0 395 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 TOMM20LQ6UXN7 152 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 ZNF600Q6ZNG1 722 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 TCF24Q7RTU0 167 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 SLC16A13Q7RTY0 426 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 NRARPQ7Z6K4 114 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 DEFB125Q8N687 156 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 LRTM2Q8N967 370 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 ZNF114Q8NC26 417 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 OR1S2Q8NGQ3 325 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
ATXN3-231ENST00000554994 GRAMD2BQ96HH9 432 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 CIB3Q96Q77 187 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-231ENST00000554994 METTL26Q96S19 204 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 RHPN1-AS1Q9BWJ2 59 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 ZNF436Q9C0F3 470 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-231ENST00000554994 FNDC4Q9H6D8 234 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-231ENST00000554994 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
ATXN3-231ENST00000554994 MRPL36Q9P0J6 103 aaKnown RBP3.49□□□□□ -1.85
ATXN3-231ENST00000554994 SMPXQ9UHP9 88 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 RABAC1Q9UI14 185 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 TBC1D24Q9ULP9 559 aa3.49□□□□□ -1.85
ATXN3-231ENST00000554994 RCL1Q9Y2P8 373 aaKnown RBP3.49□□□□□ -1.85
ATXN3-231ENST00000554994 KMT2AQ03164 3969 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 DYNC1H1Q14204 4646 aaKnown RBP3.48□□□□□ -1.85
ATXN3-231ENST00000554994 IGHV7-4-1A0A0J9YVY3 117 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 A0A1W2PS18 150 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 TMEM213A2RRL7 107 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 SNRPGP15A8MWD9 76 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 FAM90A26D6RGX4 464 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 K7EMT4 169 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 CHEK1O14757 476 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 PITX3O75364 302 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 DFFBO76075 338 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 MBPP02686 304 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-231ENST00000554994 APOHP02749 345 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-231ENST00000554994 RLN2P04090 185 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 IL4P05112 153 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 FABP1P07148 127 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 CD7P09564 240 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 FRMD6-AS1P0C7T7 363 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 METTL15P1P0C7V9 234 aa3.48□□□□□ -1.85
ATXN3-231ENST00000554994 SLC25A6P12236 298 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms