RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TXNDC17Q9BRA2 123 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 TNFRSF19Q9NS68 423 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 HIF1ANQ9NWT6 349 aa6.98□□□□□ -1.29
TDP1-210ENST00000554976 PDZD2O15018 2839 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 IGHV3OR16-10A0A075B7F0 116 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 TRAV5A0A0B4J249 113 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 WI2-2373I1.2A0A1W2PRP0 233 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 C11orf94C9JXX5 98 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 ATP6V0E1O15342 81 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 TCF21O43680 179 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 CNIH1O95406 144 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 LEMD1Q68G75 181 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 PRSS57Q6UWY2 283 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 OR5T1Q8NG75 326 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 PARLQ9H300 379 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 DNAJC4Q9NNZ3 241 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 MRPL27Q9P0M9 148 aaKnown RBP6.97□□□□□ -1.29
TDP1-210ENST00000554976 PRRC2AP48634 2157 aaKnown RBP6.97□□□□□ -1.29
TDP1-210ENST00000554976 IGHV3-21A0A0B4J1V1 117 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 NCBP2LA6PVI3 153 aaKnown RBP6.97□□□□□ -1.29
TDP1-210ENST00000554976 J3QLI3 93 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 ZNF674Q2M3X9 581 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 C9orf139Q6ZV77 190 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 FXYD5Q96DB9 178 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 C7orf69Q9H7B7 122 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 TECRQ9NZ01 308 aaKnown RBP6.97□□□□□ -1.29
TDP1-210ENST00000554976 C1RLQ9NZP8 487 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 MOB4Q9Y3A3 225 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 ZFYVE26Q68DK2 2539 aa6.97□□□□□ -1.29
TDP1-210ENST00000554976 KIR2DL5BA0A0G2JN68 375 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 KIR2DL5BA0A0G2JPC4 375 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 PDE6DO43924 150 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 BRI3O95415 125 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 C8orf88P0DMB2 117 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 KIR2DL5AQ8N109 375 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 C20orf24Q9BUV8 137 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 ZFP30Q9Y2G7 519 aa6.96□□□□□ -1.29
TDP1-210ENST00000554976 J3QKU1 62 aa6.96□□□□□ -1.3
TDP1-210ENST00000554976 NDUFB8O95169 186 aa6.96□□□□□ -1.3
TDP1-210ENST00000554976 TOMM40O96008 361 aa6.96□□□□□ -1.3
TDP1-210ENST00000554976 GP9P14770 177 aa6.96□□□□□ -1.3
TDP1-210ENST00000554976 TIGITQ495A1 244 aa6.96□□□□□ -1.3
TDP1-210ENST00000554976 PQLC2Q6ZP29 291 aa6.96□□□□□ -1.3
TDP1-210ENST00000554976 OR1L4Q8NGR5 311 aa6.96□□□□□ -1.3
TDP1-210ENST00000554976 TPRP12270 2363 aaKnown RBP6.96□□□□□ -1.3
TDP1-210ENST00000554976 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 GGTLC3B5MD39 225 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 F6UZH7 168 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 MRPS12O15235 138 aaKnown RBP6.95□□□□□ -1.3
TDP1-210ENST00000554976 PSG1P11464 419 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 PNRC1Q12796 327 aaPredicted RBP6.95□□□□□ -1.3
TDP1-210ENST00000554976 C10orf113Q5VZT2 155 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 OR51G1Q8NGK1 321 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 OR4F5Q8NH21 305 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 OR4F4Q96R69 305 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 ZNF355PQ9NSJ1 428 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 PITPNC1Q9UKF7 332 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 PUS1Q9Y606 427 aaKnown RBP eCLIP6.95□□□□□ -1.3
TDP1-210ENST00000554976 RPL23P62829 140 aaKnown RBP6.95□□□□□ -1.3
TDP1-210ENST00000554976 Q5PR19 223 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 TMEM183AQ8IXX5 376 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 UHRF2Q96PU4 802 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 RASL11BQ9BPW5 248 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 DERL1Q9BUN8 251 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 TMEM242Q9NWH2 141 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 B4DEV8 164 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 IGF1P05019 195 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 UBE2G2P60604 165 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 YPEL3P61236 119 aaPredicted RBP6.95□□□□□ -1.3
TDP1-210ENST00000554976 CFHR3Q02985 330 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 NIPSNAP3BQ9BS92 247 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 TMEM167BQ9NRX6 74 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 NAT8Q9UHE5 227 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
TDP1-210ENST00000554976 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 SH2D7A6NKC9 451 aaPredicted RBP6.94□□□□□ -1.3
TDP1-210ENST00000554976 RNF223E7ERA6 249 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 H3BRN7 92 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 TRGC1P0CF51 173 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 ELOBQ15370 118 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 C1orf194Q5T5A4 169 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 HIST2H2BCQ6DN03 193 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 LINC00305Q7Z4B0 112 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 TMEM219Q86XT9 240 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 ZNF502Q8TBZ5 544 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 VN1R17PQ8TDU5 208 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 TXN2Q99757 166 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 TMEM14CQ9P0S9 112 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 RPH3ALQ9UNE2 315 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 A0A1W2PRE2 83 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 COX7A2P2O60397 106 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 Q8WTZ3 238 aa6.94□□□□□ -1.3
TDP1-210ENST00000554976 ANK3Q12955 4377 aaKnown RBP6.94□□□□□ -1.3
TDP1-210ENST00000554976 APCP25054 2843 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 MDFIC2A0A1B0GVS7 189 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 IGHG2P01859 326 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms