RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	AQP4	P55087	323 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	TNFRSF9	Q07011	255 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	MLLT11	Q13015	90 aa	Predicted RBP	3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	KLK9	Q2XQG4	91 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	CDNF	Q49AH0	187 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	CTRB2	Q6GPI1	263 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956		Q6ZS49	121 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	GPHB5	Q86YW7	130 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	PUSL1	Q8N0Z8	303 aa	Known RBP	3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	DYNLRB2	Q8TF09	96 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	MGLL	Q99685	303 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	GINS4	Q9BRT9	223 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	DCUN1D5	Q9BTE7	237 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR51E2	Q9H255	320 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	RBKS	Q9H477	322 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	C8orf4	Q9NR00	106 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	SLC2A9	Q9NRM0	540 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	KLK9	Q9UKQ9	250 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	KCNIP3	Q9Y2W7	256 aa		3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	RBMX2	Q9Y388	322 aa	Known RBP	3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	RBM7	Q9Y580	266 aa	Known RBP	3.6	□□□□□ -1.83
PSMC6-208	ENST00000554956	IGHV3OR16-8	A0A075B7F1	116 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	IGLC7	A0M8Q6	106 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	TMEM235	A6NFC5	223 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956		A8MWP6	167 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	ARL6IP5	O75915	188 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	HLA-DQB1	P01920	261 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	CRHBP	P24387	322 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	PSMB6	P28072	239 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	RPL27A	P46776	148 aa	Known RBP	3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	OXA1L	Q15070	435 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	TIMM50	Q3ZCQ8	353 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	UFSP1	Q6NVU6	142 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	CEMP1	Q6PRD7	247 aa	Predicted RBP	3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	LYG2	Q86SG7	212 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZNF645	Q8N7E2	425 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR10W1	Q8NGF6	305 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR13F1	Q8NGS4	319 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	TMEM167A	Q8TBQ9	72 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZNF502	Q8TBZ5	544 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	GLYATL2	Q8WU03	294 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	ADTRP	Q96IZ2	230 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR2A7	Q96R45	310 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	SPIN2A	Q99865	258 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	SPIN2B	Q9BPZ2	258 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	GGTLC1	Q9BX51	225 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	CCDC90B	Q9GZT6	254 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	CCL28	Q9NRJ3	127 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	TAS2R8	Q9NYW2	309 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZNF257	Q9Y2Q1	563 aa		3.59	□□□□□ -1.83
PSMC6-208	ENST00000554956	KMT2A	Q03164	3969 aa		3.59	□□□□□ -1.84
PSMC6-208	ENST00000554956	FRAS1	Q86XX4	4008 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	IGHV3-21	A0A0B4J1V1	117 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	TRAV1-2	A0A0B4J238	106 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956		A0A1B0GWB2	263 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	ZNF207	O43670	478 aa	Known RBP	3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	DTYMK	P23919	212 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	BMI1	P35226	326 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	NUP62	P37198	522 aa	Predicted RBP	3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	TALDO1	P37837	337 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	RPL29	P47914	159 aa	Known RBP	3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR2B8P	P59922	312 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	MRPS15	P82914	257 aa	Known RBP	3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR5I1	Q13606	314 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	ARFRP1	Q13795	201 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	DEFB135	Q30KP9	77 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	HACD4	Q5VWC8	232 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	C22orf42	Q6IC83	251 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	SLC16A13	Q7RTY0	426 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR5H6	Q8NGV6	325 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	GPX8	Q8TED1	209 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	KRTAP4-4	Q9BYR3	166 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	ZNF436	Q9C0F3	470 aa	Predicted RBP	3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	ATG5	Q9H1Y0	275 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	RNF167	Q9H6Y7	350 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	ACOT13	Q9NPJ3	140 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	SCN3B	Q9NY72	215 aa		3.58	□□□□□ -1.84
PSMC6-208	ENST00000554956	IGHV3-49	A0A0A0MS15	119 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	LINC00854	A0A1B0GVQ3	168 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	TRDV1	A0A1B0GX56	115 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	ZNF705E	A8MWA4	302 aa	Predicted RBP	3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	SULT1C2	O00338	296 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	UPK2	O00526	184 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	DUSP14	O95147	198 aa	Known RBP	3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	GIG44	P09565	113 aa	Predicted RBP	3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	PGAM2	P15259	253 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	HLA-G	P17693	338 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	RAB3B	P20337	219 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	GADD45A	P24522	165 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	PSMA1	P25786	263 aa	Known RBP	3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	BCAP31	P51572	246 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	PSMD7	P51665	324 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	RPL32	P62910	135 aa	Known RBP	3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	WT1-AS	Q06250	92 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	TRAM1	Q15629	374 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	CNIH2	Q6PI25	160 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	APRG1	Q8IVJ8	170 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR4S2	Q8NH73	311 aa		3.57	□□□□□ -1.84
PSMC6-208	ENST00000554956	LGALS14	Q8TCE9	139 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms