RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 U3KQK5 164 aa9.15□□□□□ -0.94
SYNE2-214ENST00000554928 K7EQG2 157 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 ORM2P19652 201 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 BMI1P35226 326 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 LEMD1Q68G75 181 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 C17orf77Q96MU5 243 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 RCHY1Q96PM5 261 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 MGST2Q99735 147 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 FAM110AQ9BQ89 295 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 RNF126Q9BV68 326 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 TMEM231Q9H6L2 316 aa9.14□□□□□ -0.95
SYNE2-214ENST00000554928 DNASE2O00115 360 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-214ENST00000554928 ZNF688P0C7X2 276 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
SYNE2-214ENST00000554928 DEFB131AP59861 70 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 NHLH2Q02577 135 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 FCN2Q15485 313 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 PATE2Q6UY27 113 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 BPIFCQ8NFQ6 507 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 OR11H7Q8NGC8 314 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 OR1B1Q8NGR6 318 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 PPP1R1CQ8WVI7 109 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 GRAMD2BQ96HH9 432 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 NARS2Q96I59 477 aaKnown RBP9.13□□□□□ -0.95
SYNE2-214ENST00000554928 SCRT1Q9BWW7 348 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 NPVFQ9HCQ7 196 aa9.13□□□□□ -0.95
SYNE2-214ENST00000554928 FNDC10F2Z333 226 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 AGPAT2O15120 278 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 FABP1P07148 127 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 LINC00869P0C866 280 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 PVALBP20472 110 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-214ENST00000554928 SULT1A1P50225 295 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 DEFB1P60022 68 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 EWSR1Q01844 656 aaKnown RBP eCLIP9.12□□□□□ -0.95
SYNE2-214ENST00000554928 SIGLEC15Q6ZMC9 328 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 UHRF2Q96PU4 802 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 GGACTQ9BVM4 153 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 GGTLC1Q9BX51 225 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 SLC25A32Q9H2D1 315 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 SLC45A2Q9UMX9 530 aa9.12□□□□□ -0.95
SYNE2-214ENST00000554928 NBEAL2Q6ZNJ1 2754 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 STAB2Q8WWQ8 2551 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 DNAH7Q8WXX0 4024 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 LOC102724200A0A096LPH7 203 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-214ENST00000554928 TRAV2A0A0B4J234 112 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 UBE2L5PA0A1B0GUS4 154 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 HELTA6NFD8 242 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 ZNF98A6NK75 572 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 KNCNA6PVL3 124 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 MPC2O95563 127 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 CD5P06127 495 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 PAFAH1B2P68402 229 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 TEPPQ6URK8 271 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 PPP1R14BQ96C90 147 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 SLC25A22Q9H936 323 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 UQCC1Q9NVA1 299 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 WDR83OSQ9Y284 106 aa9.11□□□□□ -0.95
SYNE2-214ENST00000554928 E5RGE8 158 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 H3BRN7 92 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 SOCS3O14543 225 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 PLP1P60201 277 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 OXA1LQ15070 435 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 RGS21Q2M5E4 152 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 Q5BKY6 102 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 MORN5Q5VZ52 161 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 MIC13Q5XKP0 118 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 TMEM147Q9BVK8 224 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 SLC25A39Q9BZJ4 359 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-214ENST00000554928 ZMAT4Q9H898 229 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 NRN1Q9NPD7 142 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 MBD2Q9UBB5 411 aa9.1□□□□□ -0.95
SYNE2-214ENST00000554928 HYPMO75409 117 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 CFDP00746 253 aaPredicted RBP9.09□□□□□ -0.95
SYNE2-214ENST00000554928 RLN2P04090 185 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 OR5G3P0C626 314 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 S100A11P31949 105 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 CYCSP99999 105 aaKnown RBP9.09□□□□□ -0.95
SYNE2-214ENST00000554928 CLINT1Q14677 625 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 PSMG4Q5JS54 123 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 STX12Q86Y82 276 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 OR8I2Q8N0Y5 310 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 OR5C1Q8NGR4 320 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 THAP6Q8TBB0 222 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 TMEM37Q8WXS4 190 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 ARL6Q9H0F7 186 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 HIGD1AQ9Y241 93 aa9.09□□□□□ -0.95
SYNE2-214ENST00000554928 SNRPCP09234 159 aaKnown RBP9.08□□□□□ -0.96
SYNE2-214ENST00000554928 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
SYNE2-214ENST00000554928 FGF7P21781 194 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 CAMLGP49069 296 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 SELENOTP62341 195 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 BAXQ07812 192 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 OPCMLQ14982 345 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 C1orf194Q5T5A4 169 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
SYNE2-214ENST00000554928 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms