RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 UHRF2Q96PU4 802 aa9.5□□□□□ -0.89
RIPK3-204ENST00000554756 OR5B12Q96R08 314 aa9.5□□□□□ -0.89
RIPK3-204ENST00000554756 IMMP2LQ96T52 175 aa9.5□□□□□ -0.89
RIPK3-204ENST00000554756 SRSF8Q9BRL6 282 aaKnown RBP9.5□□□□□ -0.89
RIPK3-204ENST00000554756 PYGO2Q9BRQ0 406 aa9.5□□□□□ -0.89
RIPK3-204ENST00000554756 ZNF430Q9H8G1 570 aaPredicted RBP9.5□□□□□ -0.89
RIPK3-204ENST00000554756 LY96Q9Y6Y9 160 aa9.5□□□□□ -0.89
RIPK3-204ENST00000554756 G3V318 75 aa9.49□□□□□ -0.89
RIPK3-204ENST00000554756 H7BYZ3 331 aa9.49□□□□□ -0.89
RIPK3-204ENST00000554756 MYOD1P15172 320 aa9.49□□□□□ -0.89
RIPK3-204ENST00000554756 FXYD3Q14802 87 aa9.49□□□□□ -0.89
RIPK3-204ENST00000554756 CST9LP1Q5W188 147 aa9.49□□□□□ -0.89
RIPK3-204ENST00000554756 PFDN5Q99471 154 aa9.49□□□□□ -0.89
RIPK3-204ENST00000554756 CITED2Q99967 270 aaPredicted RBP9.49□□□□□ -0.89
RIPK3-204ENST00000554756 FAM103A1Q9BTL3 118 aaKnown RBP9.49□□□□□ -0.89
RIPK3-204ENST00000554756 CNIH1O95406 144 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 CXCL1P09341 107 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 EGR2P11161 476 aaPredicted RBP9.48□□□□□ -0.89
RIPK3-204ENST00000554756 AKR1D1P51857 326 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 SNRPEP62304 92 aaKnown RBP9.48□□□□□ -0.89
RIPK3-204ENST00000554756 SLC35B1P78383 322 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 MRGPRG-AS1Q2M3A8 158 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 OR4X2Q8NGF9 303 aa9.48□□□□□ -0.89
RIPK3-204ENST00000554756 TRAV41A0A0B4J266 112 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 A0A1W2PRX2 142 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 C9JCJ5 164 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 IGF1P05019 195 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 SMIM6P0DI80 62 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 OR10J1P30954 320 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 TNXAQ16473 311 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 PRSS8Q16651 343 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 NSUN5P1Q3KNT7 163 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 KHDC1LQ5JSQ8 128 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 FAM78BQ5VT40 261 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 ZNF343Q6P1L6 599 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 KCNIP4Q6PIL6 250 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 ZNF562Q6V9R5 426 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 OR1L4Q8NGR5 311 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 ARPC1AQ92747 370 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
RIPK3-204ENST00000554756 TGIF2-C20orf24A0A0A6YYL0 155 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 CGB1A6NKQ9 187 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 EIF3GO75821 320 aaKnown RBP eCLIP9.47□□□□□ -0.89
RIPK3-204ENST00000554756 ACTL6BO94805 426 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 PFN1P07737 140 aaKnown RBP9.47□□□□□ -0.89
RIPK3-204ENST00000554756 DEFA4P12838 97 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 RPL27AP46776 148 aaKnown RBP9.47□□□□□ -0.89
RIPK3-204ENST00000554756 ATP5G3P48201 142 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 SSBP2P81877 361 aaPredicted RBP9.47□□□□□ -0.89
RIPK3-204ENST00000554756 WT1-ASQ06250 92 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 KIAA0141Q14154 515 aaPredicted RBP9.47□□□□□ -0.89
RIPK3-204ENST00000554756 LCNL1Q6ZST4 164 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 OR10W1Q8NGF6 305 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 OR51G1Q8NGK1 321 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 SRD5A3Q9H8P0 318 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 URGCP-MRPS24S4R325 110 aa9.47□□□□□ -0.89
RIPK3-204ENST00000554756 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 NPPCP23582 126 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 RPL35P42766 123 aaKnown RBP9.46□□□□□ -0.9
RIPK3-204ENST00000554756 GALR1P47211 349 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 UBE2G2P60604 165 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 FABP9Q0Z7S8 132 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 C10orf55Q5SWW7 151 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 UNQ5815/PRO19632Q6UWF5 114 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 TMEM190Q8WZ59 177 aa9.46□□□□□ -0.9
RIPK3-204ENST00000554756 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
RIPK3-204ENST00000554756 A0A1W2PRE2 83 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 ZNF98A6NK75 572 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 GGCTO75223 188 aaKnown RBP9.45□□□□□ -0.9
RIPK3-204ENST00000554756 NDUFB4O95168 129 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 TYMSP04818 313 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 S100A9P06702 114 aaKnown RBP9.45□□□□□ -0.9
RIPK3-204ENST00000554756 CRYGCP07315 174 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 C8orf88P0DMB2 117 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 APELAP0DMC3 54 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 FAM3BP58499 235 aaPredicted RBP9.45□□□□□ -0.9
RIPK3-204ENST00000554756 CFHR3Q02985 330 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 TEX38Q6PEX7 206 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 SGMS2Q8NHU3 365 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 TRAV9-1A0A075B6T8 112 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 M0QZ24 198 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 PF4V1P10720 104 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 PPIFP30405 207 aaKnown RBP9.45□□□□□ -0.9
RIPK3-204ENST00000554756 MEOX2P50222 304 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 NDUFA11Q86Y39 141 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 STXBP6Q8NFX7 210 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 OR1P1Q8NH06 330 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 ZNF580Q9UK33 172 aa9.45□□□□□ -0.9
RIPK3-204ENST00000554756 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
RIPK3-204ENST00000554756 ADARB2-AS1A8MUL3 147 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 IGHG4P01861 327 aa9.44□□□□□ -0.9
RIPK3-204ENST00000554756 RPLP1P05386 114 aaKnown RBP9.44□□□□□ -0.9
RIPK3-204ENST00000554756 HOXA5P20719 270 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms