RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 XKRY2A2RUG3 117 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 RRHO14718 337 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 MMP23AO75900 390 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 AMBPP02760 352 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 OR10J4P0C629 311 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 HTR1DP28221 377 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 GCHFRP30047 84 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 CNN1P51911 297 aaKnown RBP8.95□□□□□ -0.98
VPS33B-204ENST00000554660 C2orf83Q53S99 150 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 CT45A1Q5HYN5 189 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 OR4A47Q6IF82 309 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 SLC25A48Q6ZT89 311 aaKnown RBP8.95□□□□□ -0.98
VPS33B-204ENST00000554660 ZNF329Q86UD4 541 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 OR1L8Q8NGR8 309 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 OR4A5Q8NH83 315 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 CT45A3Q8NHU0 189 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 OSR1Q8TAX0 266 aaPredicted RBP8.95□□□□□ -0.98
VPS33B-204ENST00000554660 TMEM190Q8WZ59 177 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 SFRP2Q96HF1 295 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 ASCL2Q99929 193 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 SLC45A2Q9UMX9 530 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 DNAH7Q8WXX0 4024 aa8.95□□□□□ -0.98
VPS33B-204ENST00000554660 DSCAML1Q8TD84 2053 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 SAA2-SAA4A0A096LPE2 208 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 A0A1W2PPQ1 181 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 hADV38S2A0JD32 116 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 PSMB11A5LHX3 300 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 UPK2O00526 184 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 NHLRC4P0CG21 123 aaPredicted RBP8.94□□□□□ -0.98
VPS33B-204ENST00000554660 SAA2P0DJI9 122 aaPredicted RBP8.94□□□□□ -0.98
VPS33B-204ENST00000554660 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 IL3RAP26951 378 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 ZNF134P52741 427 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 SELENOTP62341 195 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 RPL39P5Q59GN2 51 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 GFI1BQ5VTD9 330 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 CST9LP1Q5W188 147 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 FAM53AQ6NSI3 398 aaPredicted RBP8.94□□□□□ -0.98
VPS33B-204ENST00000554660 PQLC2Q6ZP29 291 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 GATAD1Q8WUU5 269 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 CACNG8Q8WXS5 425 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 RBM14Q96PK6 669 aaKnown RBP8.94□□□□□ -0.98
VPS33B-204ENST00000554660 DUX3Q96PT4 197 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 PRR25Q96S07 402 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 MRPL32Q9BYC8 188 aaKnown RBP8.94□□□□□ -0.98
VPS33B-204ENST00000554660 LINC00312Q9Y6C7 94 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 STAB2Q8WWQ8 2551 aa8.94□□□□□ -0.98
VPS33B-204ENST00000554660 C3orf84H3BNL1 204 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 HMGB3O15347 200 aaKnown RBP8.93□□□□□ -0.98
VPS33B-204ENST00000554660 NDUFB4O95168 129 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 ESDP10768 282 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 BRS3P32247 399 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 GPX4P36969 197 aaPredicted RBP8.93□□□□□ -0.98
VPS33B-204ENST00000554660 ATP5G3P48201 142 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 TAS2R45P59539 299 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 MIC13Q5XKP0 118 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 TEX38Q6PEX7 206 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 ZNF833PQ6ZTB9 187 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 GBGT1Q8N5D6 347 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 STPG3Q8N7X2 389 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 KLHL30-AS1Q8NEE0 82 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 OR10G8Q8NGN5 311 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 ZNF596Q8TC21 504 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 MCRIP2Q9BUT9 160 aaKnown RBP8.93□□□□□ -0.98
VPS33B-204ENST00000554660 GAL3ST2Q9H3Q3 398 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 PLEKHA3Q9HB20 300 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 TECRQ9NZ01 308 aaKnown RBP8.93□□□□□ -0.98
VPS33B-204ENST00000554660 IL36BQ9NZH7 164 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 DPM3Q9P2X0 92 aa8.93□□□□□ -0.98
VPS33B-204ENST00000554660 TENM2Q9NT68 2774 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 MT-ND6P03923 174 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 OR5G3P0C626 314 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 GZMBP10144 247 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 DDTP30046 118 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 GAMTQ14353 236 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 IQCJQ1A5X6 159 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 FAM78BQ5VT40 261 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 MRPL52Q86TS9 123 aaKnown RBP8.92□□□□□ -0.98
VPS33B-204ENST00000554660 ABHD12Q8N2K0 398 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 LINC00311Q8N616 119 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 LINC00469Q8N7U9 141 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 VSTM2AQ8TAG5 236 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 ELOVL1Q9BW60 279 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 FUT9Q9Y231 359 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 OR51B2Q9Y5P1 312 aa8.92□□□□□ -0.98
VPS33B-204ENST00000554660 A0A1W2PN81 502 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 A0A1W2PRE2 83 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 SLC31A2O15432 143 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 CA2P00918 260 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 APOA2P02652 100 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 LINC00869P0C866 280 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 CHRNA7P36544 502 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 PAFAH1B2P68402 229 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 TMEM177Q53S58 311 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 SPINK9Q5DT21 86 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 CASC10Q5T4H9 136 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 NECAP1Q8NC96 275 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 SLC35D1Q9NTN3 355 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 LINC00527Q9UJ94 153 aa8.91□□□□□ -0.98
VPS33B-204ENST00000554660 MOB4Q9Y3A3 225 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms