RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 C14orf166Q9Y224 244 aaKnown RBP3.06□□□□□ -1.92
VTI1B-203ENST00000554636 LOC102724200A0A096LPH7 203 aaPredicted RBP3.05□□□□□ -1.92
VTI1B-203ENST00000554636 IGHV3-49A0A0A0MS15 119 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 FABP12A6NFH5 140 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 CORTO00230 105 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 GNG7O60262 68 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 TMEM50AO95807 157 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 IFNA17P01571 189 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 ETV6P41212 452 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 SPCS3P61009 180 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 SUPT4H1P63272 117 aaKnown RBP3.05□□□□□ -1.92
VTI1B-203ENST00000554636 ANKRD55Q3KP44 614 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 C14orf177Q52M58 125 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 NMSQ5H8A3 153 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 ZFAND6Q6FIF0 208 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 ZNF600Q6ZNG1 722 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 RBPMS2Q6ZRY4 209 aaKnown RBP3.05□□□□□ -1.92
VTI1B-203ENST00000554636 SLC16A13Q7RTY0 426 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 CCDC190Q86UF4 302 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 DUSP18Q8NEJ0 188 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 RNASE11Q8TAA1 199 aaKnown RBP3.05□□□□□ -1.92
VTI1B-203ENST00000554636 IL22RA2Q969J5 263 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 RNF125Q96EQ8 232 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 RRNAD1Q96FB5 475 aaKnown RBP3.05□□□□□ -1.92
VTI1B-203ENST00000554636 GALNT14Q96FL9 552 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 RNF2Q99496 336 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 PDCD10Q9BUL8 212 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 RHPN1-AS1Q9BWJ2 59 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 SRRQ9GZT4 340 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 VSIRQ9H7M9 311 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 UBQLN2Q9UHD9 624 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 SMPXQ9UHP9 88 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 SCP2D1Q9UJQ7 156 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 TMEM56-RWDD3S4R434 201 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 AGRNO00468 2067 aa3.05□□□□□ -1.92
VTI1B-203ENST00000554636 DNAH17Q9UFH2 4485 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 DYNC1H1Q14204 4646 aaKnown RBP3.04□□□□□ -1.92
VTI1B-203ENST00000554636 IGHV3OR16-13A0A075B7E8 117 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 IGHV3-74A0A0B4J1X5 117 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 A0A0B4J2A0 478 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 LCE6AA0A183 80 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 A0A1B0GU03 582 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 OR4C46A6NHA9 309 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 USP17L23D6RBM5 183 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 ZNF701M0R085 212 aaPredicted RBP3.04□□□□□ -1.92
VTI1B-203ENST00000554636 PITX3O75364 302 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 CLN5O75503 358 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 YIF1AO95070 293 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 IGKV1-17P01599 117 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 IGLC1P0CG04 106 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 SULT1A3P0DMM9 295 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 SULT1A4P0DMN0 295 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 NPY1RP25929 384 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 SNCAP37840 140 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 OPRK1P41145 380 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 HTR2BP41595 481 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 NPBWR1P48145 328 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 CCR6P51684 374 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 TIGITQ495A1 244 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 C2orf83Q53S99 150 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 LAMTOR1Q6IAA8 161 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 TCF24Q7RTU0 167 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 FAM24BQ8N5W8 94 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 TMEM116Q8NCL8 245 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 OR1S2Q8NGQ3 325 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 OR4X1Q8NH49 305 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 SCGB3A2Q96PL1 93 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 OVOL2Q9BRP0 275 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 GINS3Q9BRX5 216 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 ENY2Q9NPA8 101 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.04□□□□□ -1.92
VTI1B-203ENST00000554636 MCUBQ9NWR8 336 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 SHPKQ9UHJ6 478 aa3.04□□□□□ -1.92
VTI1B-203ENST00000554636 PUS1Q9Y606 427 aaKnown RBP eCLIP3.04□□□□□ -1.92
VTI1B-203ENST00000554636 HECTD4Q9Y4D8 3996 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 TRAV14DV4A0A0A6YYC5 116 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 TRAV2A0A0B4J234 112 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 IGHV3-66A0A0C4DH42 116 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 KIR2DL5BA0A0G2JN68 375 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 KIR2DL5BA0A0G2JPC4 375 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 DUXBA0A1W2PPF3 345 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 CCDC160A6NGH7 325 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 PMS2P5A8MQ11 134 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 CEBPZOSA8MTT3 80 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 UBE2CO00762 179 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 SFT2D2O95562 160 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 AKR1C4P17516 323 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 RPL35AP18077 110 aaKnown RBP3.03□□□□□ -1.92
VTI1B-203ENST00000554636 CRYBB3P26998 211 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 BMI1P35226 326 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 FAUP35544 74 aaKnown RBP3.03□□□□□ -1.92
VTI1B-203ENST00000554636 TFPI2P48307 235 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 RND2P52198 227 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 SUB1P53999 127 aaKnown RBP eCLIP3.03□□□□□ -1.923e-8■■□□□ 12.5
VTI1B-203ENST00000554636 APOC4P55056 127 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 AP3S2P59780 193 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 SRPXP78539 464 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 EWSR1Q01844 656 aaKnown RBP eCLIP3.03□□□□□ -1.92
VTI1B-203ENST00000554636 TNFRSF9Q07011 255 aa3.03□□□□□ -1.92
VTI1B-203ENST00000554636 PPP1R1AQ13522 171 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms