RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ACOT7LQ6ZUV0 252 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 TMEM144Q7Z5S9 345 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 TRPT1Q86TN4 253 aaKnown RBP5.52□□□□□ -1.53
LINC00640-201ENST00000554409 STHQ8IWL8 128 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 ZNF431Q8TF32 576 aaPredicted RBP5.52□□□□□ -1.53
LINC00640-201ENST00000554409 RAB40CQ96S21 281 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 PBDC1Q9BVG4 233 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 WDR12Q9GZL7 423 aaKnown RBP5.52□□□□□ -1.53
LINC00640-201ENST00000554409 NRN1Q9NPD7 142 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 NUDT15Q9NV35 164 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 TBC1D24Q9ULP9 559 aa5.52□□□□□ -1.53
LINC00640-201ENST00000554409 TRAV6A0A075B6T7 132 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 A0A0J9YWU9 116 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 H3BP45 60 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 CA1P00915 261 aaPredicted RBP5.51□□□□□ -1.53
LINC00640-201ENST00000554409 MBPP02686 304 aaPredicted RBP5.51□□□□□ -1.53
LINC00640-201ENST00000554409 ZNF688P0C7X2 276 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 SPP1P10451 314 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 SNRPD3P62318 126 aaKnown RBP5.51□□□□□ -1.53
LINC00640-201ENST00000554409 AKR1C1Q04828 323 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 MZT2BQ6NZ67 158 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 MORN3Q6PF18 240 aaPredicted RBP5.51□□□□□ -1.53
LINC00640-201ENST00000554409 BPIFCQ8NFQ6 507 aa5.51□□□□□ -1.53
LINC00640-201ENST00000554409 RCL1Q9Y2P8 373 aaKnown RBP5.51□□□□□ -1.53
LINC00640-201ENST00000554409 NBEAL2Q6ZNJ1 2754 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 LCE6AA0A183 80 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 FAM240BA0A1B0GVZ2 78 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 K7EPK0 472 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 SOCS3O14543 225 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 CCSO14618 274 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 UPK1BO75841 260 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 CCNKO75909 580 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 SCGB1D2O95969 90 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 S100A7P31151 101 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 PSMB3P49720 205 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 OR2F1Q13607 317 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 ZNF846Q147U1 533 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 PSMG4Q5JS54 123 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 SAMD13Q5VXD3 122 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 C12orf45Q8N5I9 185 aaPredicted RBP5.5□□□□□ -1.53
LINC00640-201ENST00000554409 TMEM217Q8N7C4 229 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 OR10P1Q8NGE3 313 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 RARRES2Q99969 163 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 SEC22CQ9BRL7 303 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 C11orf68Q9H3H3 251 aaKnown RBP5.5□□□□□ -1.53
LINC00640-201ENST00000554409 GSKIPQ9P0R6 139 aa5.5□□□□□ -1.53
LINC00640-201ENST00000554409 SMCO3A2RU48 225 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 C7orf66A4D0T2 115 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 KNCNA6PVL3 124 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 IL5P05113 134 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 GIG44P09565 113 aaPredicted RBP5.49□□□□□ -1.53
LINC00640-201ENST00000554409 METTL15P1P0C7V9 234 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 C4BPBP20851 252 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 GATA2P23769 480 aaPredicted RBP5.49□□□□□ -1.53
LINC00640-201ENST00000554409 MEOX2P50222 304 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 PLP1P60201 277 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 SELENOTP62341 195 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 EWSR1Q01844 656 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC00640-201ENST00000554409 IL15RAQ13261 267 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 ACTL10Q5JWF8 245 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 TMEM182Q6ZP80 229 aaPredicted RBP5.49□□□□□ -1.53
LINC00640-201ENST00000554409 CYP2G1PQ6ZSU1 146 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 OR11H2Q8NH07 326 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 PPP1R14BQ96C90 147 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 C2orf50Q96LR7 162 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 CLUHP3Q96NS8 147 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 GPR82Q96P67 336 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 GGACTQ9BVM4 153 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 C11orf1Q9H5F2 150 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 NPVFQ9HCQ7 196 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 BATF3Q9NR55 127 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 MGAT4CQ9UBM8 478 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 AGRNO00468 2067 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 CSMD3Q7Z407 3707 aa5.49□□□□□ -1.53
LINC00640-201ENST00000554409 DYNC2H1Q8NCM8 4307 aaKnown RBP5.48□□□□□ -1.53
LINC00640-201ENST00000554409 C5orf51A6NDU8 294 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 NUPR2A6NF83 97 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 ZNF98A6NK75 572 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 ZNF705EA8MWA4 302 aaPredicted RBP5.48□□□□□ -1.53
LINC00640-201ENST00000554409 H3BMM0 161 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 H3BRN7 92 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 ISLRO14498 428 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 DEDDO75618 318 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 HLA-DRB4P13762 266 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 ORM2P19652 201 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 ID1P41134 155 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 GALR1P47211 349 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 NUTF2P61970 127 aaKnown RBP5.48□□□□□ -1.53
LINC00640-201ENST00000554409 RRAS2P62070 204 aaPredicted RBP5.48□□□□□ -1.53
LINC00640-201ENST00000554409 IFITM3Q01628 133 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 PXDC1Q5TGL8 231 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 SPATA31B1PQ5VZV4 182 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 TEPPQ6URK8 271 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 GSG1LQ6UXU4 331 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 OR8I2Q8N0Y5 310 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 CSNK1G2-AS1Q8NCQ2 148 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 OR1B1Q8NGR6 318 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 ENKURQ8TC29 256 aa5.48□□□□□ -1.53
LINC00640-201ENST00000554409 SHANK2-AS3Q9BTD1 123 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms