RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 PSG7Q13046 419 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 PAFAH1B3Q15102 231 aaKnown RBP3.42□□□□□ -1.86
ATXN3-225ENST00000554214 TAL2Q16559 108 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 DEFB110Q30KQ9 67 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 TTC32Q5I0X7 151 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 ZNF684Q5T5D7 378 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR2T5Q6IEZ7 315 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 SFXN4Q6P4A7 337 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 CD164L2Q6UWJ8 174 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 C17orf64Q86WR6 236 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-225ENST00000554214 NPWQ8N729 165 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 ZNF740Q8NDX6 193 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR4K17Q8NGC6 315 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR10P1Q8NGE3 313 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR8B12Q8NGG6 310 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR1L8Q8NGR8 309 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR2T29Q8NH02 315 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 ATP6V0E2Q8NHE4 81 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 VSTM2AQ8TAG5 236 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR5P2Q8WZ92 322 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 BORCS7Q96B45 105 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 DDIT4LQ96D03 193 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 COX14Q96I36 57 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 CYYR1Q96J86 154 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 RASL11BQ9BPW5 248 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 TSSK6Q9BXA6 273 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 MRPL32Q9BYC8 188 aaKnown RBP3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR2H1Q9GZK4 316 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 PRTFDC1Q9NRG1 225 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 ACER3Q9NUN7 267 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 ABRACLQ9P1F3 81 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 OR5V1Q9UGF6 321 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 SLC2A6Q9UGQ3 507 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 ZNF443Q9Y2A4 671 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-225ENST00000554214 LSM2Q9Y333 95 aaKnown RBP3.42□□□□□ -1.86
ATXN3-225ENST00000554214 WASHC3Q9Y3C0 194 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 ATRQ13535 2644 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 DOCK10Q96BY6 2186 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 STAB1Q9NY15 2570 aa3.42□□□□□ -1.86
ATXN3-225ENST00000554214 JMJD1CQ15652 2540 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 TRBV6-7A0A0A0MS04 114 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 TRAV14DV4A0A0A6YYC5 116 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 A0A0A6YYD5 115 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 DAPL1A0PJW8 107 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 ODAMA1E959 279 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 OR51F1A6NGY5 319 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 FXYD1O00168 92 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 GPX1P07203 203 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 SCTP09683 121 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 PIRTP0C851 137 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 FABP2P12104 132 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 IFITM1P13164 125 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 ELK1P19419 428 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 GPX3P22352 226 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 CA7P43166 264 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 MARCKSL1P49006 195 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 ZNF83P51522 516 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 H2BFSP57053 126 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 UBE2MP61081 183 aaKnown RBP3.41□□□□□ -1.86
ATXN3-225ENST00000554214 RPL31P62899 125 aaKnown RBP3.41□□□□□ -1.86
ATXN3-225ENST00000554214 HLA-DRB3P79483 266 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 EWSR1Q01844 656 aaKnown RBP eCLIP3.41□□□□□ -1.86
ATXN3-225ENST00000554214 ZNF92Q03936 586 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 PPP1R1AQ13522 171 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 RPEL1Q2QD12 228 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 HLA-DRB5Q30154 266 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 SLC25A35Q3KQZ1 300 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 PAGE3Q5JUK9 113 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 GLYATL3Q5SZD4 288 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 IGFL3Q6UXB1 125 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 DPPA3Q6W0C5 159 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 TMEM64Q6YI46 380 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 STAC2Q6ZMT1 411 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 LINC00336Q6ZUF6 198 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 ZFP62Q8NB50 900 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-225ENST00000554214 TMEM229BQ8NBD8 167 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 WFDC11Q8NEX6 87 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 OR5AR1Q8NGP9 310 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 OR10D3Q8NH80 312 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 GEMIN6Q8WXD5 167 aaKnown RBP3.41□□□□□ -1.86
ATXN3-225ENST00000554214 TMEM101Q96IK0 257 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 MCHR1Q99705 422 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 PRADC1Q9BSG0 188 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 REEP1Q9H902 201 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 IDI2-AS1Q9NZ38 188 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 PRNDQ9UKY0 176 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 TP53TG1Q9Y2A0 90 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 POLDIP2Q9Y2S7 368 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 MED31Q9Y3C7 131 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 YTHDF2Q9Y5A9 579 aaKnown RBP3.41□□□□□ -1.86
ATXN3-225ENST00000554214 HEBP2Q9Y5Z4 205 aa3.41□□□□□ -1.86
ATXN3-225ENST00000554214 FN1P02751 2386 aaKnown RBP3.41□□□□□ -1.86
ATXN3-225ENST00000554214 NCOA6Q14686 2063 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-225ENST00000554214 CACNA1CQ13936 2221 aa3.4□□□□□ -1.86
ATXN3-225ENST00000554214 TRAV9-2A0A087WT02 112 aa3.4□□□□□ -1.87
ATXN3-225ENST00000554214 TRGV10A0A0A0MS01 117 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms