RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CLEC7AQ9BXN2 247 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 B9A039 149 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 LYZP61626 148 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 NUTF2P61970 127 aaKnown RBP11.62□□□□□ -0.55
ACTN1-211ENST00000553882 FAM231DQ6ZW35 169 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 TCF24Q7RTU0 167 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 STXBP6Q8NFX7 210 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 C18orf32Q8TCD1 76 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 GRAMD2BQ96HH9 432 aa11.62□□□□□ -0.55
ACTN1-211ENST00000553882 PPIAL4CA0A0B4J2A2 164 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 CRYGBP07316 175 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 PPIAL4GP0DN37 164 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 MUC15Q8N387 334 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 TSKUQ8WUA8 353 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 C7orf69Q9H7B7 122 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 WNK2Q9Y3S1 2297 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 TRAV8-1A0A0A6YYK1 113 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 TEX22C9J3V5 150 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
ACTN1-211ENST00000553882 PSG1P11464 419 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 GP9P14770 177 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 RAB4AP20338 218 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 CASP6P55212 293 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 Q8N976 141 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 OR2D3Q8NGH3 330 aa11.61□□□□□ -0.55
ACTN1-211ENST00000553882 SRSF12Q8WXF0 261 aaKnown RBP11.61□□□□□ -0.55
ACTN1-211ENST00000553882 F11RQ9Y624 299 aaKnown RBP11.61□□□□□ -0.55
ACTN1-211ENST00000553882 SPTBN1Q01082 2364 aaKnown RBP11.61□□□□□ -0.55
ACTN1-211ENST00000553882 TCAPO15273 167 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 SSX8Q7RTT4 187 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 Q9H3A6 140 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 ONECUT1Q9UBC0 465 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 COL6A6A6NMZ7 2263 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 CD24P25063 80 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 GPR82Q96P67 336 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 WNT10AQ9GZT5 417 aa11.6□□□□□ -0.55
ACTN1-211ENST00000553882 RBP4P02753 201 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 RBPJQ06330 500 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 LDLRAD2Q5SZI1 272 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 Q71RC1 249 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-211ENST00000553882 NIT1Q86X76 327 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 C8orf46Q8TAG6 207 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 SIAH2O43255 324 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 CNIH1O95406 144 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 C3orf79P0CE67 100 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 G0S2P27469 103 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 BATFQ16520 125 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 ATOH7Q8N100 152 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 EXOC3-AS1Q8N2X6 119 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 HIGD1AQ9Y241 93 aa11.59□□□□□ -0.55
ACTN1-211ENST00000553882 IGLC1P0CG04 106 aa11.58□□□□□ -0.55
ACTN1-211ENST00000553882 PVRIGQ6DKI7 326 aa11.58□□□□□ -0.55
ACTN1-211ENST00000553882 C5orf17Q8NAS9 161 aa11.58□□□□□ -0.55
ACTN1-211ENST00000553882 WIPF2Q8TF74 440 aaPredicted RBP11.58□□□□□ -0.55
ACTN1-211ENST00000553882 VKORC1Q9BQB6 163 aa11.58□□□□□ -0.55
ACTN1-211ENST00000553882 SCNM1Q9BWG6 230 aa11.58□□□□□ -0.55
ACTN1-211ENST00000553882 A6NNC1 897 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 TIMM23O14925 209 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 TCRAP04437 139 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 NBL1P41271 181 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 PCP4P48539 62 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 ASCL2Q99929 193 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 KLF12Q9Y4X4 402 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 HILPDAQ9Y5L2 63 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 S4R3C0 116 aa11.58□□□□□ -0.56
ACTN1-211ENST00000553882 MMDQ15546 238 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 LCN12Q6JVE5 192 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 RNASEKQ6P5S7 137 aaKnown RBP11.57□□□□□ -0.56
ACTN1-211ENST00000553882 MLST8Q9BVC4 326 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 CACNA1BQ00975 2339 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 A0A1W2PRD5 423 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 A0A1W2PRF3 423 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 A0A1W2PRM7 423 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 HSBP1O75506 76 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 P01737 135 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 ZNF672Q499Z4 452 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-211ENST00000553882 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 RASL11BQ9BPW5 248 aa11.57□□□□□ -0.56
ACTN1-211ENST00000553882 SLC25A39Q9BZJ4 359 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-211ENST00000553882 RPP21Q9H633 154 aaKnown RBP11.57□□□□□ -0.56
ACTN1-211ENST00000553882 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-211ENST00000553882 ARF6P62330 175 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 SPATA45Q537H7 98 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 KIR3DL3Q8N743 410 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 BORCS7Q96B45 105 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 I3L2K1 104 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 K7ENP7 123 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 M0QZ24 198 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 TOMM40O96008 361 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 LTAP01374 205 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 AKAP6Q13023 2319 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 KLF17Q5JT82 389 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-211ENST00000553882 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-211ENST00000553882 OR4B1Q8NGF8 309 aa11.56□□□□□ -0.56
ACTN1-211ENST00000553882 ALKBH7Q9BT30 221 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms