RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TSC22D2O75157 780 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 IGKV1-17P01599 117 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 CD7P09564 240 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 TFPI2P48307 235 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 AP2S1P53680 142 aaPredicted RBP6.26□□□□□ -1.41
PSEN1-209ENST00000553855 S100A10P60903 97 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 CYCSP99999 105 aaKnown RBP6.26□□□□□ -1.41
PSEN1-209ENST00000553855 GAMTQ14353 236 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 NRARPQ7Z6K4 114 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 BPIFCQ8NFQ6 507 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 TMEM170AQ8WVE7 144 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 SMIM8Q96KF7 97 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 RNF2Q99496 336 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 SRD5A3Q9H8P0 318 aa6.26□□□□□ -1.41
PSEN1-209ENST00000553855 MRPL36Q9P0J6 103 aaKnown RBP6.26□□□□□ -1.41
PSEN1-209ENST00000553855 NBEAL2Q6ZNJ1 2754 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 IGHV3-66A0A0C4DH42 116 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 MPTX1A8MV57 137 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 GOSR2O14653 212 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 MBPP02686 304 aaPredicted RBP6.25□□□□□ -1.41
PSEN1-209ENST00000553855 PSG1P11464 419 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 CRYBB3P26998 211 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 P2RY1P47900 373 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 CAV2P51636 162 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 LYZP61626 148 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 NHLH2Q02577 135 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 C11orf87Q6NUJ2 197 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 GBGT1Q8N5D6 347 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 DEFB125Q8N687 156 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 RNF125Q96EQ8 232 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 TRGV9Q99603 122 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 VSIRQ9H7M9 311 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 RCL1Q9Y2P8 373 aaKnown RBP6.25□□□□□ -1.41
PSEN1-209ENST00000553855 U3KQK5 164 aa6.25□□□□□ -1.41
PSEN1-209ENST00000553855 LOC102724200A0A096LPH7 203 aaPredicted RBP6.24□□□□□ -1.41
PSEN1-209ENST00000553855 NPIPB6E9PJ23 425 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 DFFBO76075 338 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 METTL15P1P0C7V9 234 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 APOC4P55056 127 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 RRAS2P62070 204 aaPredicted RBP6.24□□□□□ -1.41
PSEN1-209ENST00000553855 HBG1P69891 147 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 HBG2P69892 147 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 DLK1P80370 383 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 IFITM3Q01628 133 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 OR2F1Q13607 317 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 RAB31Q13636 194 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 ACOT7LQ6ZUV0 252 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 TMEM144Q7Z5S9 345 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 STX12Q86Y82 276 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 SBSPONQ8IVN8 264 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 GGTLC1Q9BX51 225 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 NPVFQ9HCQ7 196 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 FBXL17Q9UF56 701 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 UBQLN2Q9UHD9 624 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 RNF24Q9Y225 148 aa6.24□□□□□ -1.41
PSEN1-209ENST00000553855 TRAV2A0A0B4J234 112 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 DIRC3C9JPN6 131 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 FNDC10F2Z333 226 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 K7EPK0 472 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 PTTG1O95997 202 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 PET100P0DJ07 73 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 SELENOTP62341 195 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 ZNF90Q03938 601 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 TMEM14EPQ6UXP3 125 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 THAP8Q8NA92 274 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 RCHY1Q96PM5 261 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 FAM110AQ9BQ89 295 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 MARVELD1Q9BSK0 173 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 TMEM147Q9BVK8 224 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 GGACTQ9BVM4 153 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 MS4A6AQ9H2W1 248 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 SORL1Q92673 2214 aa6.23□□□□□ -1.41
PSEN1-209ENST00000553855 C7orf66A4D0T2 115 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 APOHP02749 345 aaPredicted RBP6.22□□□□□ -1.41
PSEN1-209ENST00000553855 ORM2P19652 201 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 S100A11P31949 105 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 ID1P41134 155 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 SNRPD3P62318 126 aaKnown RBP6.22□□□□□ -1.41
PSEN1-209ENST00000553855 SLC38A11Q08AI6 406 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 USF2Q15853 346 aaPredicted RBP6.22□□□□□ -1.41
PSEN1-209ENST00000553855 HAGHQ16775 308 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 C1orf194Q5T5A4 169 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 SAMD13Q5VXD3 122 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 FAM90A2PQ658T7 463 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 C16orf54Q6UWD8 224 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 SIGLEC15Q6ZMC9 328 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 CYP2G1PQ6ZSU1 146 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 OR8I2Q8N0Y5 310 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 OR1B1Q8NGR6 318 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 WWC2-AS2Q96NR7 200 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 SLC25A31Q9H0C2 315 aa6.22□□□□□ -1.41
PSEN1-209ENST00000553855 FAM24AA6NFZ4 105 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 E5RGE8 158 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 UBE2CO00762 179 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 DEDDO75618 318 aa6.21□□□□□ -1.42
PSEN1-209ENST00000553855 GALR1P47211 349 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms