RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 BPIFCQ8NFQ6 507 aa15□□□□□ -0.01
FOXA1-203ENST00000553751 MARVELD1Q9BSK0 173 aa15□□□□□ -0.01
FOXA1-203ENST00000553751 C1orf194Q5T5A4 169 aa14.99□□□□□ -0.01
FOXA1-203ENST00000553751 CYP2G1PQ6ZSU1 146 aa14.99□□□□□ -0.01
FOXA1-203ENST00000553751 MGAT4CQ9UBM8 478 aa14.99□□□□□ -0.01
FOXA1-203ENST00000553751 SLC45A2Q9UMX9 530 aa14.99□□□□□ -0.01
FOXA1-203ENST00000553751 TP53TG1Q9Y2A0 90 aa14.99□□□□□ -0.01
FOXA1-203ENST00000553751 CSMD3Q7Z407 3707 aa14.99□□□□□ -0.01
FOXA1-203ENST00000553751 STARD9Q9P2P6 4700 aa14.98□□□□□ -0.01
FOXA1-203ENST00000553751 S100A10P60903 97 aa14.98□□□□□ -0.01
FOXA1-203ENST00000553751 RAB32Q13637 225 aa14.98□□□□□ -0.01
FOXA1-203ENST00000553751 GGACTQ9BVM4 153 aa14.98□□□□□ -0.01
FOXA1-203ENST00000553751 NPVFQ9HCQ7 196 aa14.98□□□□□ -0.01
FOXA1-203ENST00000553751 FBXL17Q9UF56 701 aa14.98□□□□□ -0.01
FOXA1-203ENST00000553751 SPRY2O43597 315 aa14.97□□□□□ -0.01
FOXA1-203ENST00000553751 CAV2P51636 162 aa14.97□□□□□ -0.01
FOXA1-203ENST00000553751 PSMG4Q5JS54 123 aa14.97□□□□□ -0.01
FOXA1-203ENST00000553751 PPP1R14BQ96C90 147 aa14.97□□□□□ -0.01
FOXA1-203ENST00000553751 RNF183Q96D59 192 aa14.97□□□□□ -0.01
FOXA1-203ENST00000553751 CSTL1Q9H114 145 aa14.97□□□□□ -0.01
FOXA1-203ENST00000553751 GOSR2O14653 212 aa14.96□□□□□ -0.01
FOXA1-203ENST00000553751 DEDDO75618 318 aa14.96□□□□□ -0.01
FOXA1-203ENST00000553751 ORM2P19652 201 aa14.96□□□□□ -0.01
FOXA1-203ENST00000553751 PVALBP20472 110 aaPredicted RBP14.96□□□□□ -0.01
FOXA1-203ENST00000553751 BCAP31P51572 246 aa14.96□□□□□ -0.01
FOXA1-203ENST00000553751 CASC10Q5T4H9 136 aa14.96□□□□□ -0.01
FOXA1-203ENST00000553751 TEPPQ6URK8 271 aa14.96□□□□□ -0.01
FOXA1-203ENST00000553751 OR1B1Q8NGR6 318 aa14.96□□□□□ -0.01
FOXA1-203ENST00000553751 SEPSECSQ9HD40 501 aaKnown RBP14.96□□□□□ -0.01
FOXA1-203ENST00000553751 LYRM2Q9NU23 88 aaPredicted RBP14.96□□□□□ -0.01
FOXA1-203ENST00000553751 FAM24AA6NFZ4 105 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 KNCNA6PVL3 124 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 SIX6O95475 246 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 LYL1P12980 280 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 SNRPD3P62318 126 aaKnown RBP14.95□□□□□ -0.02
FOXA1-203ENST00000553751 SELENOTP62341 195 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 SLC38A11Q08AI6 406 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 TRPT1Q86TN4 253 aaKnown RBP14.95□□□□□ -0.02
FOXA1-203ENST00000553751 STHQ8IWL8 128 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 OR8I2Q8N0Y5 310 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 TMEM147Q9BVK8 224 aa14.95□□□□□ -0.02
FOXA1-203ENST00000553751 ZNF98A6NK75 572 aa14.94□□□□□ -0.02
FOXA1-203ENST00000553751 SOCS3O14543 225 aa14.94□□□□□ -0.02
FOXA1-203ENST00000553751 CST7O76096 145 aa14.94□□□□□ -0.02
FOXA1-203ENST00000553751 LINC00869P0C866 280 aa14.94□□□□□ -0.02
FOXA1-203ENST00000553751 PLP1P60201 277 aa14.94□□□□□ -0.02
FOXA1-203ENST00000553751 SLC25A32Q9H2D1 315 aa14.94□□□□□ -0.02
FOXA1-203ENST00000553751 DOK5Q9P104 306 aa14.94□□□□□ -0.02
FOXA1-203ENST00000553751 AGRNO00468 2067 aa14.93□□□□□ -0.02
FOXA1-203ENST00000553751 IGSF23A1L1A6 192 aa14.93□□□□□ -0.02
FOXA1-203ENST00000553751 H3BRN7 92 aa14.93□□□□□ -0.02
FOXA1-203ENST00000553751 CA1P00915 261 aaPredicted RBP14.93□□□□□ -0.02
FOXA1-203ENST00000553751 ACTL10Q5JWF8 245 aa14.93□□□□□ -0.02
FOXA1-203ENST00000553751 TMEM217Q8N7C4 229 aa14.93□□□□□ -0.02
FOXA1-203ENST00000553751 NMES1Q9C002 83 aa14.93□□□□□ -0.02
FOXA1-203ENST00000553751 SLC25A22Q9H936 323 aa14.93□□□□□ -0.02
FOXA1-203ENST00000553751 SULT1A1P50225 295 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 ZFAND6Q6FIF0 208 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 ZNF546Q86UE3 836 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 TMEM252Q8N6L7 170 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 C17orf77Q96MU5 243 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 MGST2Q99735 147 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 SHANK2-AS3Q9BTD1 123 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 SCRT1Q9BWW7 348 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 SLC25A39Q9BZJ4 359 aaPredicted RBP14.92□□□□□ -0.02
FOXA1-203ENST00000553751 HIGD1AQ9Y241 93 aa14.92□□□□□ -0.02
FOXA1-203ENST00000553751 AGPAT2O15120 278 aa14.91□□□□□ -0.02
FOXA1-203ENST00000553751 HYPMO75409 117 aa14.91□□□□□ -0.02
FOXA1-203ENST00000553751 H2BFSP57053 126 aa14.91□□□□□ -0.02
FOXA1-203ENST00000553751 VWC2Q2TAL6 325 aa14.91□□□□□ -0.02
FOXA1-203ENST00000553751 GATAD1Q8WUU5 269 aa14.91□□□□□ -0.02
FOXA1-203ENST00000553751 GIG44P09565 113 aaPredicted RBP14.9□□□□□ -0.02
FOXA1-203ENST00000553751 S100A7P31151 101 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 GALR1P47211 349 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 PSMB3P49720 205 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 RAP2BP61225 183 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 STX12Q86Y82 276 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 GPR82Q96P67 336 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 UHRF2Q96PU4 802 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 UQCC1Q9NVA1 299 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 DYNC2H1Q8NCM8 4307 aaKnown RBP14.9□□□□□ -0.02
FOXA1-203ENST00000553751 RYR3Q15413 4870 aa14.9□□□□□ -0.02
FOXA1-203ENST00000553751 A0A0J9YWU9 116 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 SSNA1O43805 119 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 OR5G3P0C626 314 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 SPP1P10451 314 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 C4BPBP20851 252 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 PATE2Q6UY27 113 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 ARL6Q9H0F7 186 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 WDR83OSQ9Y284 106 aa14.89□□□□□ -0.03
FOXA1-203ENST00000553751 H0YIZ8 118 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 ISLRO14498 428 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 PTTG1O95997 202 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 S100A11P31949 105 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 ID1P41134 155 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 MEOX2P50222 304 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 CYCSP99999 105 aaKnown RBP14.88□□□□□ -0.03
FOXA1-203ENST00000553751 LRRC37A5PQ49AS3 106 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 PXDC1Q5TGL8 231 aa14.88□□□□□ -0.03
FOXA1-203ENST00000553751 SAMD13Q5VXD3 122 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms