RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 Q8TCH9 128 aa3.28□□□□□ -1.88
RDH11-204ENST00000553578 C8orf44Q96CB5 159 aa3.28□□□□□ -1.88
RDH11-204ENST00000553578 OR8B2Q96RD0 313 aa3.28□□□□□ -1.88
RDH11-204ENST00000553578 SLC25A33Q9BSK2 321 aa3.28□□□□□ -1.88
RDH11-204ENST00000553578 TP53TG3Q9ULZ0 132 aa3.28□□□□□ -1.88
RDH11-204ENST00000553578 LINC00869P0C866 280 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 CRYBB3P26998 211 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 MFAP5Q13361 173 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 DIAPH2-AS1Q14236 149 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 IBA57Q5T440 356 aaKnown RBP3.28□□□□□ -1.89
RDH11-204ENST00000553578 PIP4P1Q86T03 277 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 ZNF695Q8IW36 515 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 IL17DQ8TAD2 202 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 TMEM70Q9BUB7 260 aa3.28□□□□□ -1.89
RDH11-204ENST00000553578 MED12LQ86YW9 2145 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 IGHV1-45A0A0A0MS14 117 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 PIN1P1O15428 100 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 CST7O76096 145 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 RDH5Q92781 318 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 TMEM101Q96IK0 257 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 MLST8Q9BVC4 326 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 NAA60Q9H7X0 242 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 STARD5Q9NSY2 213 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 A0A087WZ39 114 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 FAM240AA0A1B0GVK7 77 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 NBR2O15453 112 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 OR2H2O95918 312 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 NHLRC4P0CG21 123 aaPredicted RBP3.27□□□□□ -1.89
RDH11-204ENST00000553578 GP9P14770 177 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 RPL31P62899 125 aaKnown RBP3.27□□□□□ -1.89
RDH11-204ENST00000553578 C10orf128Q5T292 105 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 AMTNQ6UX39 209 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 TMEM54Q969K7 222 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 RNASE7Q9H1E1 156 aaKnown RBP3.27□□□□□ -1.89
RDH11-204ENST00000553578 SLC39A9Q9NUM3 307 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 CHCHD2Q9Y6H1 151 aaPredicted RBP3.27□□□□□ -1.89
RDH11-204ENST00000553578 TRIOO75962 3097 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 A0A1W2PRD5 423 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 CD300LBA8K4G0 201 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 H0YJW9 148 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 EFNA2O43921 213 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 SS18L1O75177 396 aaPredicted RBP3.27□□□□□ -1.89
RDH11-204ENST00000553578 SLC25A5P05141 298 aaKnown RBP3.27□□□□□ -1.89
RDH11-204ENST00000553578 ORM2P19652 201 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 FOXG1P55316 489 aaPredicted RBP3.27□□□□□ -1.89
RDH11-204ENST00000553578 GFERP55789 205 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 ZNF117Q03924 483 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 FOXI1Q12951 378 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 SRSF9Q13242 221 aaKnown RBP eCLIP3.27□□□□□ -1.89
RDH11-204ENST00000553578 IGFBP7Q16270 282 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 REG3GQ6UW15 175 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 IGFL2Q6UWQ7 119 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 HOGA1Q86XE5 327 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 OR5C1Q8NGR4 320 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 C18orf32Q8TCD1 76 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 NMNAT3Q96T66 252 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 RASL11BQ9BPW5 248 aa3.27□□□□□ -1.89
RDH11-204ENST00000553578 IGLV5-45A0A087WSX0 123 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 CEACAM18A8MTB9 384 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 IGLC6P0CF74 106 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 FOLR3P41439 243 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 TAS2R45P59539 299 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 Q0VG73 95 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 RBMY1FQ15415 496 aaKnown RBP3.26□□□□□ -1.89
RDH11-204ENST00000553578 TBC1D28Q2M2D7 210 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 COX8CQ7Z4L0 72 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 LSM10Q969L4 123 aaKnown RBP3.26□□□□□ -1.89
RDH11-204ENST00000553578 C2orf48Q96LS8 159 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 PMCHL2Q9BQD1 86 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 TM2D1Q9BX74 207 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 LINC00312Q9Y6C7 94 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 TMSB15BA0A087X1C1 80 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 A0A0U1RQV1 116 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 TMEM262E9PQX1 116 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 COX6A1P12074 109 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 B3GALT5-AS1P59052 145 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 OR1C1Q15619 314 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 MS4A18Q3C1V0 323 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 C1orf195Q5TG92 126 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 GATD1Q8NB37 220 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 ZNF114Q8NC26 417 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 C8orf49Q96NF6 230 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 ZNF286AQ9HBT8 521 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 PTPRBP23467 1997 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 IGKV3D-15A0A087WSY6 115 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 TNFSF11O14788 317 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 IGHV3-7P01780 117 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 PRSS1P07477 247 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
RDH11-204ENST00000553578 CACNG7P62955 275 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 LINC01620Q4KN68 170 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 ABCA11PQ4W5N1 156 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 PPP1R27Q86WC6 154 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 OR10G8Q8NGN5 311 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 FGFBP3Q8TAT2 258 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 TSKUQ8WUA8 353 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 SSBP3Q9BWW4 388 aaPredicted RBP3.26□□□□□ -1.89
RDH11-204ENST00000553578 PRNDQ9UKY0 176 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 PRRC2CQ9Y520 2896 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms