RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 LSM5Q9Y4Y9 91 aaKnown RBP7.51□□□□□ -1.21
LINC00517-201ENST00000553396 A0A0J9YWU9 116 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 PMS2P5A8MQ11 134 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 CA1P00915 261 aaPredicted RBP7.5□□□□□ -1.21
LINC00517-201ENST00000553396 NUP62P37198 522 aaPredicted RBP7.5□□□□□ -1.21
LINC00517-201ENST00000553396 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 TMEM14EPQ6UXP3 125 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 TMEM182Q6ZP80 229 aaPredicted RBP7.5□□□□□ -1.21
LINC00517-201ENST00000553396 RNF183Q96D59 192 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 NRN1Q9NPD7 142 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 PFDN2Q9UHV9 154 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 TP53TG1Q9Y2A0 90 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 STARD9Q9P2P6 4700 aa7.5□□□□□ -1.21
LINC00517-201ENST00000553396 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 L7N2F9 121 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 TSC22D2O75157 780 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 ORM2P19652 201 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 S100A10P60903 97 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 VAMP2P63027 116 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 IFITM3Q01628 133 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 ACTL10Q5JWF8 245 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 BPIFCQ8NFQ6 507 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 OR10P1Q8NGE3 313 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 SLC25A22Q9H936 323 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 DOK5Q9P104 306 aa7.49□□□□□ -1.21
LINC00517-201ENST00000553396 K7EPK0 472 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 IL5P05113 134 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 BCAP31P51572 246 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 TAS2R30P59541 319 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 SNRPD3P62318 126 aaKnown RBP7.48□□□□□ -1.21
LINC00517-201ENST00000553396 DLK1P80370 383 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 EWSR1Q01844 656 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00517-201ENST00000553396 RYR3Q15413 4870 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 CYP2G1PQ6ZSU1 146 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 TMEM144Q7Z5S9 345 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 NRARPQ7Z6K4 114 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 TRPT1Q86TN4 253 aaKnown RBP7.48□□□□□ -1.21
LINC00517-201ENST00000553396 OR8I2Q8N0Y5 310 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 OR1B1Q8NGR6 318 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 MGAT4CQ9UBM8 478 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 FBXL17Q9UF56 701 aa7.48□□□□□ -1.21
LINC00517-201ENST00000553396 CSMD3Q7Z407 3707 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 CFDP00746 253 aaPredicted RBP7.47□□□□□ -1.21
LINC00517-201ENST00000553396 C4BPBP20851 252 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 CAV2P51636 162 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 DEFB1P60022 68 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 SLC38A11Q08AI6 406 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 ARL16Q0P5N6 197 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 PMS2P11Q13670 270 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 OR11H2Q8NH07 326 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 IL17DQ8TAD2 202 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 C2orf50Q96LR7 162 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 RARRES2Q99969 163 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 TMEM147Q9BVK8 224 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 SLC25A32Q9H2D1 315 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 BATF3Q9NR55 127 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 TENM2Q9NT68 2774 aa7.47□□□□□ -1.21
LINC00517-201ENST00000553396 DYNC2H1Q8NCM8 4307 aaKnown RBP7.46□□□□□ -1.21
LINC00517-201ENST00000553396 ZNF98A6NK75 572 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 GOSR2O14653 212 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 CST7O76096 145 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 OR5G3P0C626 314 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 LINC00869P0C866 280 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 RAB32Q13637 225 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 C1orf194Q5T5A4 169 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 TMEM217Q8N7C4 229 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 GATAD1Q8WUU5 269 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 LINC00052Q96N35 136 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 SCRT1Q9BWW7 348 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 GPN1Q9HCN4 374 aaPredicted RBP7.46□□□□□ -1.22
LINC00517-201ENST00000553396 NPVFQ9HCQ7 196 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 CLEC5AQ9NY25 188 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 SLC45A2Q9UMX9 530 aa7.46□□□□□ -1.22
LINC00517-201ENST00000553396 CXorf65A6NEN9 183 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 FAM24AA6NFZ4 105 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 INMT-MINDY4F8WBC2 141 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 SOCS3O14543 225 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 DEFB4AO15263 64 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 SIX6O95475 246 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 IGKV3-20P01619 116 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 GIG44P09565 113 aaPredicted RBP7.45□□□□□ -1.22
LINC00517-201ENST00000553396 SPP1P10451 314 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 PVALBP20472 110 aaPredicted RBP7.45□□□□□ -1.22
LINC00517-201ENST00000553396 ID1P41134 155 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 GALR1P47211 349 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 PSMB3P49720 205 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 DEFA1P59665 94 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 DEFA3P59666 94 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 RAP2BP61225 183 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 GDF5OSQ5U4N7 250 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 MORN3Q6PF18 240 aaPredicted RBP7.45□□□□□ -1.22
LINC00517-201ENST00000553396 TEPPQ6URK8 271 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 UHRF2Q96PU4 802 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 SLC25A39Q9BZJ4 359 aaPredicted RBP7.45□□□□□ -1.22
LINC00517-201ENST00000553396 C11orf1Q9H5F2 150 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 HIGD1AQ9Y241 93 aa7.45□□□□□ -1.22
LINC00517-201ENST00000553396 IGSF23A1L1A6 192 aa7.44□□□□□ -1.22
LINC00517-201ENST00000553396 FNDC10F2Z333 226 aa7.44□□□□□ -1.22
LINC00517-201ENST00000553396 H3BRN7 92 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms