RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TERB2Q8NHR7 220 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 PPP1R14BQ96C90 147 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 ABHD1Q96SE0 405 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 NAA60Q9H7X0 242 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 RPRMQ9NS64 109 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 PFDN2Q9UHV9 154 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 EPM2AB3EWF7 344 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 FAM25AB3EWG3 89 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 FAM25CB3EWG5 89 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 FAM25GB3EWG6 89 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 TNFAIP8O95379 198 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 INSP01308 110 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 ATP5G1P05496 136 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 TBPP20226 339 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 TSPOP30536 169 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 ATP5G3P48201 142 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 CNN1P51911 297 aaKnown RBP6.32□□□□□ -1.4
SYNE2-209ENST00000553308 NCS1P62166 190 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 GAMTQ14353 236 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 CLINT1Q14677 625 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 NOXA1Q86UR1 476 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 LGI3Q8N145 548 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 OR4C16Q8NGL9 310 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 C17orf77Q96MU5 243 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 RTBDNQ9BSG5 229 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-209ENST00000553308 SLC25A32Q9H2D1 315 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 Q9H8V8 135 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 PRR13Q9NZ81 148 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 MTFP1Q9UDX5 166 aa6.32□□□□□ -1.4
SYNE2-209ENST00000553308 C14orf166Q9Y224 244 aaKnown RBP6.32□□□□□ -1.4
SYNE2-209ENST00000553308 TRAV12-2A0A075B6T6 113 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 RAB3DO95716 219 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 SULT1A3P0DMM9 295 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 SULT1A4P0DMN0 295 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 MEOX2P50222 304 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 DLK1P80370 383 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 TTC32Q5I0X7 151 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 GPR107Q5VW38 600 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 SAMD13Q5VXD3 122 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 DTD1Q8TEA8 209 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 SLC35E1Q96K37 410 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 RBKSQ9H477 322 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 SLC25A22Q9H936 323 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 U3KQ87 197 aa6.31□□□□□ -1.4
SYNE2-209ENST00000553308 APOBP04114 4563 aaKnown RBP6.3□□□□□ -1.4
SYNE2-209ENST00000553308 IGKV1OR2-108A0A075B7D4 117 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 CBY3A6NI87 242 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 CRYM-AS1A6NIL9 109 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 SNRPGP15A8MWD9 76 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 ATP6V1G2O95670 118 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 FABP1P07148 127 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 BTF3P20290 206 aaKnown RBP6.3□□□□□ -1.4
SYNE2-209ENST00000553308 GALR1P47211 349 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 TAS2R19P59542 299 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 VBP1P61758 197 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 STEAP1BQ6NZ63 245 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 RNF182Q8N6D2 247 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 TMEM229BQ8NBD8 167 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 TRGV9Q99603 122 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 RSG1Q9BU20 258 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 SLC25A39Q9BZJ4 359 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-209ENST00000553308 Q9H3A6 140 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 EXTL2Q9UBQ6 330 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 HSPB7Q9UBY9 170 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 TMEM56-RWDD3S4R434 201 aa6.3□□□□□ -1.4
SYNE2-209ENST00000553308 TRAV8-2A0A0B4J237 113 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 ZNF98A6NK75 572 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 BOLA2-SMG1P6H3BVE0 249 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 GABARAPH6UMI1 98 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
SYNE2-209ENST00000553308 GABARAPO95166 117 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 PRB4P10163 310 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-209ENST00000553308 HTN1P15515 57 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 FUSP35637 526 aaKnown RBP eCLIP6.29□□□□□ -1.4
SYNE2-209ENST00000553308 GPX4P36969 197 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-209ENST00000553308 B2MP61769 119 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 GPR141Q7Z602 305 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 LINC01587Q99440 93 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 CACFD1Q9UGQ2 172 aa6.29□□□□□ -1.4
SYNE2-209ENST00000553308 TRAV26-1A0A087WT03 109 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 A0A0J9YY99 117 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 CCR6P51684 374 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 OR5I1Q13606 314 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 SMCO1Q147U7 214 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 SURF2Q15527 256 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-209ENST00000553308 LYZL2Q7Z4W2 148 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 THAP8Q8NA92 274 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 ZNF738Q8NE65 137 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 IL22RA2Q969J5 263 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 GNPNAT1Q96EK6 184 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-209ENST00000553308 C16orf74Q96GX8 76 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 FUNDC2Q9BWH2 189 aa6.28□□□□□ -1.4
SYNE2-209ENST00000553308 NOP10Q9NPE3 64 aaKnown RBP6.28□□□□□ -1.4
SYNE2-209ENST00000553308 ZNF586Q9NXT0 402 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms