RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 K7EPK0 472 aa14.1□□□□□ -0.15
PTCH1-227ENST00000553256 METTL15P1P0C7V9 234 aa14.1□□□□□ -0.15
PTCH1-227ENST00000553256 LYZP61626 148 aa14.1□□□□□ -0.15
PTCH1-227ENST00000553256 PBDC1Q9BVG4 233 aa14.1□□□□□ -0.15
PTCH1-227ENST00000553256 CFDP00746 253 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-227ENST00000553256 FABP1P07148 127 aa14.09□□□□□ -0.15
PTCH1-227ENST00000553256 NUP62P37198 522 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-227ENST00000553256 PLP1P60201 277 aa14.09□□□□□ -0.15
PTCH1-227ENST00000553256 ZFAND6Q6FIF0 208 aa14.09□□□□□ -0.15
PTCH1-227ENST00000553256 NRARPQ7Z6K4 114 aa14.09□□□□□ -0.15
PTCH1-227ENST00000553256 C2orf50Q96LR7 162 aa14.09□□□□□ -0.15
PTCH1-227ENST00000553256 KNCNA6PVL3 124 aa14.08□□□□□ -0.16
PTCH1-227ENST00000553256 SCGB1D2O95969 90 aa14.08□□□□□ -0.16
PTCH1-227ENST00000553256 DEDDO75618 318 aa14.07□□□□□ -0.16
PTCH1-227ENST00000553256 ATF4P18848 351 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-227ENST00000553256 CYP2G1PQ6ZSU1 146 aa14.07□□□□□ -0.16
PTCH1-227ENST00000553256 GATAD1Q8WUU5 269 aa14.07□□□□□ -0.16
PTCH1-227ENST00000553256 MARVELD1Q9BSK0 173 aa14.07□□□□□ -0.16
PTCH1-227ENST00000553256 GGACTQ9BVM4 153 aa14.07□□□□□ -0.16
PTCH1-227ENST00000553256 A0A0J9YWU9 116 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 ZNF98A6NK75 572 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 C4BPBP20851 252 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 AKR1C1Q04828 323 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 PSMG4Q5JS54 123 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 GSG1LQ6UXU4 331 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 CSNK1G2-AS1Q8NCQ2 148 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 NPVFQ9HCQ7 196 aa14.06□□□□□ -0.16
PTCH1-227ENST00000553256 RRAS2P62070 204 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-227ENST00000553256 PATE2Q6UY27 113 aa14.05□□□□□ -0.16
PTCH1-227ENST00000553256 BPIFCQ8NFQ6 507 aa14.05□□□□□ -0.16
PTCH1-227ENST00000553256 OR10P1Q8NGE3 313 aa14.05□□□□□ -0.16
PTCH1-227ENST00000553256 IL17DQ8TAD2 202 aa14.05□□□□□ -0.16
PTCH1-227ENST00000553256 SLC25A32Q9H2D1 315 aa14.05□□□□□ -0.16
PTCH1-227ENST00000553256 FBXL17Q9UF56 701 aa14.05□□□□□ -0.16
PTCH1-227ENST00000553256 FAM25EA8MYX2 175 aa14.04□□□□□ -0.16
PTCH1-227ENST00000553256 H3BMM0 161 aa14.04□□□□□ -0.16
PTCH1-227ENST00000553256 H3BRN7 92 aa14.04□□□□□ -0.16
PTCH1-227ENST00000553256 CA1P00915 261 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-227ENST00000553256 VWC2Q2TAL6 325 aa14.04□□□□□ -0.16
PTCH1-227ENST00000553256 ENKURQ8TC29 256 aa14.04□□□□□ -0.16
PTCH1-227ENST00000553256 PFDN2Q9UHV9 154 aa14.04□□□□□ -0.16
PTCH1-227ENST00000553256 C5orf51A6NDU8 294 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 DEFB1P60022 68 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 SELENOTP62341 195 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 RAB32Q13637 225 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 ACTL10Q5JWF8 245 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 GDF5OSQ5U4N7 250 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 STHQ8IWL8 128 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 SHANK2-AS3Q9BTD1 123 aa14.03□□□□□ -0.16
PTCH1-227ENST00000553256 LYRM2Q9NU23 88 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-227ENST00000553256 LSM5Q9Y4Y9 91 aaKnown RBP14.03□□□□□ -0.16
PTCH1-227ENST00000553256 FAM24AA6NFZ4 105 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 INMT-MINDY4F8WBC2 141 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 MRPS12O15235 138 aaKnown RBP14.02□□□□□ -0.17
PTCH1-227ENST00000553256 SPP1P10451 314 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 HLA-DRB4P13762 266 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 ORM2P19652 201 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 PSMB3P49720 205 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 SNRPD3P62318 126 aaKnown RBP14.02□□□□□ -0.17
PTCH1-227ENST00000553256 SLC38A11Q08AI6 406 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 MORN3Q6PF18 240 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-227ENST00000553256 TEPPQ6URK8 271 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 OR8I2Q8N0Y5 310 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 C20orf173Q96LM9 149 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 MGST2Q99735 147 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 SCRT1Q9BWW7 348 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 SLC25A39Q9BZJ4 359 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-227ENST00000553256 HLA-DRB4X5D2U9 266 aa14.02□□□□□ -0.17
PTCH1-227ENST00000553256 IGSF23A1L1A6 192 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 SMCO3A2RU48 225 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 ZNF705EA8MWA4 302 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-227ENST00000553256 PRAF2O60831 178 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 LINC00869P0C866 280 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 TMEM252Q8N6L7 170 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 OR1B1Q8NGR6 318 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 CLUHP3Q96NS8 147 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 RARRES2Q99969 163 aa14.01□□□□□ -0.17
PTCH1-227ENST00000553256 C11orf68Q9H3H3 251 aaKnown RBP14.01□□□□□ -0.17
PTCH1-227ENST00000553256 TRAV8-2A0A0B4J237 113 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 LCE6AA0A183 80 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 A8MTW9 85 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 H0YIZ8 118 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 ISLRO14498 428 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 Q8NAQ8 132 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 OR11H2Q8NH07 326 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 TMEM147Q9BVK8 224 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 SAV1Q9H4B6 383 aaPredicted RBP14□□□□□ -0.17
PTCH1-227ENST00000553256 MGAT4CQ9UBM8 478 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 WDR83OSQ9Y284 106 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 X6R8D5 127 aa14□□□□□ -0.17
PTCH1-227ENST00000553256 VPS13DQ5THJ4 4388 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 AGPAT2O15120 278 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 HYPMO75409 117 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 CST7O76096 145 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 SIX6O95475 246 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 H2BFSP57053 126 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 TMEM41BQ5BJD5 291 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 UHRF2Q96PU4 802 aa13.99□□□□□ -0.17
PTCH1-227ENST00000553256 GPN1Q9HCN4 374 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms