RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
DDX23-217ENST00000553065 NARS2Q96I59 477 aaKnown RBP7.55□□□□□ -1.2
DDX23-217ENST00000553065 PBDC1Q9BVG4 233 aa7.55□□□□□ -1.2
DDX23-217ENST00000553065 SLC35B3Q9H1N7 401 aa7.55□□□□□ -1.2
DDX23-217ENST00000553065 SAV1Q9H4B6 383 aaPredicted RBP7.55□□□□□ -1.2
DDX23-217ENST00000553065 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
DDX23-217ENST00000553065 TRAV8-2A0A0B4J237 113 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 A8MTW9 85 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 WRBO00258 174 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 SYNGR2O43760 224 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 CCNKO75909 580 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 IGKV3-20P01619 116 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 ANXA3P12429 323 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 BTCP35070 178 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 LYZP61626 148 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 SRPXP78539 464 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 C1orf194Q5T5A4 169 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 IGFL4Q6B9Z1 124 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 AMTNQ6UX39 209 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 CLUHP3Q96NS8 147 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 SLC25A21Q9BQT8 299 aaPredicted RBP7.54□□□□□ -1.2
DDX23-217ENST00000553065 TMED3Q9Y3Q3 217 aa7.54□□□□□ -1.2
DDX23-217ENST00000553065 IGHV4-4A0A075B6R2 117 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 ZNF98A6NK75 572 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 C11orf94C9JXX5 98 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 VAMP1P23763 118 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 TCTAP57738 103 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 SNRPD3P62318 126 aaKnown RBP7.53□□□□□ -1.2
DDX23-217ENST00000553065 POLR2GP62487 172 aaKnown RBP eCLIP7.53□□□□□ -1.2
DDX23-217ENST00000553065 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 OR4D5Q8NGN0 318 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 SLC35E1Q96K37 410 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 LINC00052Q96N35 136 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 NEU1Q99519 415 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 SLC25A32Q9H2D1 315 aa7.53□□□□□ -1.2
DDX23-217ENST00000553065 TRAV10A0A0B4J240 114 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 A0A0J9YX75 114 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 H3BP45 60 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 CRXO43186 299 aaPredicted RBP7.52□□□□□ -1.21
DDX23-217ENST00000553065 SPANXN5Q5MJ07 72 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 FAM78BQ5VT40 261 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 PATE2Q6UY27 113 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 FOXI2Q6ZQN5 318 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 RSG1Q9BU20 258 aa7.52□□□□□ -1.21
DDX23-217ENST00000553065 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 PLA2G10O15496 165 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 NDUFB6O95139 128 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 PRB4P10163 310 aaPredicted RBP7.51□□□□□ -1.21
DDX23-217ENST00000553065 FAUP35544 74 aaKnown RBP7.51□□□□□ -1.21
DDX23-217ENST00000553065 PSMB3P49720 205 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 AP3S2P59780 193 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 RAB11AP62491 216 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 ARL16Q0P5N6 197 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 OR8I2Q8N0Y5 310 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 CENPSQ8N2Z9 138 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 DEDD2Q8WXF8 326 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 RNF126Q9BV68 326 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 LRP1BQ9NZR2 4599 aa7.51□□□□□ -1.21
DDX23-217ENST00000553065 A0A1B0GVY2 172 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 ISLRO14498 428 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 MRPS12O15235 138 aaKnown RBP7.5□□□□□ -1.21
DDX23-217ENST00000553065 OR4E1P0C645 316 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 ORM2P19652 201 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 ANXA7P20073 488 aaKnown RBP7.5□□□□□ -1.21
DDX23-217ENST00000553065 PSG9Q00887 426 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 TMEM14EPQ6UXP3 125 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 ACOT7LQ6ZUV0 252 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 TMEM144Q7Z5S9 345 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 OR4B1Q8NGF8 309 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 SMIM8Q96KF7 97 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 C1QTNF4Q9BXJ3 329 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 DKK2Q9UBU2 259 aa7.5□□□□□ -1.21
DDX23-217ENST00000553065 PAIP2BQ9ULR5 123 aaKnown RBP7.5□□□□□ -1.21
DDX23-217ENST00000553065 IGHV3OR16-12A0A075B7B8 117 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 LINC00854A0A1B0GVQ3 168 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 ZNF701M0R085 212 aaPredicted RBP7.49□□□□□ -1.21
DDX23-217ENST00000553065 NOL3O60936 208 aaKnown RBP7.49□□□□□ -1.21
DDX23-217ENST00000553065 MED6O75586 246 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 AMBPP02760 352 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 S100A5P33763 92 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 ID1P41134 155 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 EMP1P54849 157 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 PLP1P60201 277 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 UBE2MP61081 183 aaKnown RBP7.49□□□□□ -1.21
DDX23-217ENST00000553065 NUTF2P61970 127 aaKnown RBP7.49□□□□□ -1.21
DDX23-217ENST00000553065 RNF182Q8N6D2 247 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 CIB3Q96Q77 187 aaPredicted RBP7.49□□□□□ -1.21
DDX23-217ENST00000553065 SLC25A39Q9BZJ4 359 aaPredicted RBP7.49□□□□□ -1.21
DDX23-217ENST00000553065 SLC25A22Q9H936 323 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 PSENENQ9NZ42 101 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 SLC45A2Q9UMX9 530 aa7.49□□□□□ -1.21
DDX23-217ENST00000553065 PLAC8L1A1L4L8 177 aa7.48□□□□□ -1.21
DDX23-217ENST00000553065 CCDC160A6NGH7 325 aa7.48□□□□□ -1.21
DDX23-217ENST00000553065 SMIM9A6NGZ8 99 aa7.48□□□□□ -1.21
DDX23-217ENST00000553065 H3BRN7 92 aa7.48□□□□□ -1.21
DDX23-217ENST00000553065 RTL8CO15255 209 aa7.48□□□□□ -1.21
DDX23-217ENST00000553065 CFDP00746 253 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms