RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	PDXP	Q96GD0	296 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	PFDN5	Q99471	154 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	HSPB9	Q9BQS6	159 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	CHST6	Q9GZX3	395 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	TMEM222	Q9H0R3	208 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	IFI27L2	Q9H2X8	130 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	PDF	Q9HBH1	243 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	MED29	Q9NX70	200 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	TAAR3P	Q9P1P4	343 aa		5.06	□□□□□ -1.6
PFKM-231	ENST00000553055	C7orf66	A4D0T2	115 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055		A6NDX4	124 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	PLA2G10	O15496	165 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	OR7C2	O60412	319 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	GADD45G	O95257	159 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	LY6G6D	O95868	133 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	KRTAP10-9	P60411	292 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	GLT8D1	Q68CQ7	371 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	CYB5R2	Q6BCY4	276 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	TEX261	Q6UWH6	196 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	C10orf111	Q8N326	155 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055		Q8N9W7	124 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	PBOV1	Q9GZY1	135 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	TPT1P8	Q9HAU6	139 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	MED9	Q9NWA0	146 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	TXNL4B	Q9NX01	149 aa	Known RBP	5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	RASL12	Q9NYN1	266 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	COPZ2	Q9P299	210 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	NUBP2	Q9Y5Y2	271 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055		U3KQ87	197 aa		5.05	□□□□□ -1.6
PFKM-231	ENST00000553055	NUP214	P35658	2090 aa	Predicted RBP	5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	DSPP	Q9NZW4	1301 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	IGHV3-64D	A0A0J9YX35	117 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	FAM168B	A1KXE4	195 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	CPSF4	O95639	269 aa	Known RBP	5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	PDYN	P01213	254 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	LHX2	P50458	406 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	WNT4	P56705	351 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	SMIM11A	P58511	58 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	TNFAIP6	P98066	277 aa	Predicted RBP	5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	C12orf73	Q69YU5	71 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	NOXRED1	Q6NXP6	359 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	C1orf174	Q8IYL3	243 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	LINC00471	Q8N535	108 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055		Q8N976	141 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	FER1L6-AS1	Q8NA97	138 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	ST6GALNAC3	Q8NDV1	305 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	GPR119	Q8TDV5	335 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	STARD4	Q96DR4	205 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	ERMAP	Q96PL5	475 aa	Predicted RBP	5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	LYSMD1	Q96S90	227 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	PKMYT1	Q99640	499 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	TSSK6	Q9BXA6	273 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	JPT1	Q9UK76	154 aa		5.04	□□□□□ -1.6
PFKM-231	ENST00000553055	COL27A1	Q8IZC6	1860 aa	Predicted RBP	5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	TACC2	O95359	2948 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	KRTAP9-6	A0A140TA67	174 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	TRDV1	A0A1B0GX56	115 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	C10orf142	B7Z368	130 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	ATP6V1G2-DDX39B	F2Z307	99 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	OR1I1	O60431	355 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	HLA-DQA1	P01909	254 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	PIRT	P0C851	137 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	MPC1L	P0DKB6	136 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	AKR1C3	P42330	323 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	EIF3I	Q13347	325 aa	Known RBP	5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	RHEB	Q15382	184 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	CST6	Q15828	149 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	LUZP6	Q538Z0	58 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	MKX	Q8IYA7	352 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	CD177	Q8N6Q3	437 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	ZNF615	Q8N8J6	731 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	C15orf56	Q8N910	161 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	RBPMS	Q93062	196 aa	Known RBP	5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	CMBL	Q96DG6	245 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	WFDC1	Q9HC57	220 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	SLC23A2	Q9UGH3	650 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	SCP2D1	Q9UJQ7	156 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	PRSS21	Q9Y6M0	314 aa		5.03	□□□□□ -1.6
PFKM-231	ENST00000553055	CCDC88C	Q9P219	2028 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	SHANK1	Q9Y566	2161 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	NOTCH1	P46531	2555 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	IGHV3OR15-7	A0A075B7D8	119 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	MEIKIN	A0A087WXM9	373 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	TMEM223	A0PJW6	202 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055		M0R233	179 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	TLX1NB	P0CAT3	122 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	OPRM1	P35372	400 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	G6PC	P35575	357 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	PPP1CC	P36873	323 aa	Known RBP	5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	EVX1	P49640	407 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	EMP1	P54849	157 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	IGLV3-21	P80748	117 aa	Predicted RBP	5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	CDK6	Q00534	326 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	LOXL1	Q08397	574 aa	Predicted RBP	5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	SMIM21	Q3B7S5	101 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	ZFAND6	Q6FIF0	208 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	LRRC28	Q86X40	367 aa	Predicted RBP	5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	ZNF664	Q8N3J9	261 aa		5.02	□□□□□ -1.61
PFKM-231	ENST00000553055	OR13C8	Q8NGS7	320 aa		5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms