RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SIGLEC15Q6ZMC9 328 aa7.72□□□□□ -1.17
TRAFD1-208ENST00000552890 TMEM217Q8N7C4 229 aa7.72□□□□□ -1.17
TRAFD1-208ENST00000552890 SCGB1C1Q8TD33 95 aa7.72□□□□□ -1.17
TRAFD1-208ENST00000552890 ST8SIA2Q92186 375 aa7.72□□□□□ -1.17
TRAFD1-208ENST00000552890 NRN1Q9NPD7 142 aa7.72□□□□□ -1.17
TRAFD1-208ENST00000552890 MRPL36Q9P0J6 103 aaKnown RBP7.72□□□□□ -1.17
TRAFD1-208ENST00000552890 IGKV1D-37A0A075B6S9 117 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 IGHV3OR16-8A0A075B7F1 116 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 KIR2DL5BA0A0G2JN68 375 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 KIR2DL5BA0A0G2JPC4 375 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 FAM24AA6NFZ4 105 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 AGPAT2O15120 278 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 COX7A2P2O60397 106 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 SIX6O95475 246 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 LINC00869P0C866 280 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 IGHV4-30-4P0DP06 118 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 ORM2P19652 201 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 RPL12P30050 165 aaKnown RBP7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 NUTF2P61970 127 aaKnown RBP7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 ZNF90Q03938 601 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 USF2Q15853 346 aaPredicted RBP7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 KIR2DL5AQ8N109 375 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 OR5C1Q8NGR4 320 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 KIR2DL5BQ8NHK3 375 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 GATAD1Q8WUU5 269 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 PARD6GQ9BYG4 376 aaPredicted RBP7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 DNAJC4Q9NNZ3 241 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 WDR83OSQ9Y284 106 aa7.71□□□□□ -1.18
TRAFD1-208ENST00000552890 IGKV1OR2-108A0A075B7D4 117 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 LOC102724200A0A096LPH7 203 aaPredicted RBP7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 PRB2P02812 416 aaPredicted RBP7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 OR5G3P0C626 314 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 LYL1P12980 280 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 EWSR1Q01844 656 aaKnown RBP eCLIP7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 OR2F1Q13607 317 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 C11orf87Q6NUJ2 197 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 BPIFA4PQ86YQ2 179 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 Q8N1Y9 231 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 STXBP6Q8NFX7 210 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 GLMPQ8WWB7 406 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 ATP5SQ99766 215 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 C19orf73Q9NVV2 129 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 HSPB11Q9Y547 144 aa7.7□□□□□ -1.18
TRAFD1-208ENST00000552890 IGSF23A1L1A6 192 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 IZUMO1RA6ND01 250 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 ZNF98A6NK75 572 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 ISLRO14498 428 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 TAAR5O14804 337 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 FRMD6-AS1P0C7T7 363 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 ATF4P18848 351 aaPredicted RBP7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 CXCL2P19875 107 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 FGF7P21781 194 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 PSMB3P49720 205 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 B2MP61769 119 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 GUK1Q16774 197 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 C10orf113Q5VZT2 155 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 HAPLN4Q86UW8 402 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 SPATA25Q9BR10 227 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 SHANK2-AS3Q9BTD1 123 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 GGTLC1Q9BX51 225 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 SLC25A39Q9BZJ4 359 aaPredicted RBP7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 ARL6Q9H0F7 186 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 ARV1Q9H2C2 271 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 SRD5A3Q9H8P0 318 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 MBD2Q9UBB5 411 aa7.69□□□□□ -1.18
TRAFD1-208ENST00000552890 IGHV3-49A0A0A0MS15 119 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 BORCS7-ASMTA0A0B4J1R7 106 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 UBE2L5PA0A1B0GUS4 154 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 K7EQG2 157 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 MBP02144 154 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 NHLH2Q02577 135 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 FCN2Q15485 313 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 STHQ8IWL8 128 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 OR2T35Q8NGX2 323 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 LRRC20Q8TCA0 184 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 AQP10Q96PS8 301 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 RNF126Q9BV68 326 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 SLC39A9Q9NUM3 307 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 OR5AC2Q9NZP5 309 aa7.68□□□□□ -1.18
TRAFD1-208ENST00000552890 IGHV3OR16-13A0A075B7E8 117 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 IGHV3-74A0A0B4J1X5 117 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 CCNKO75909 580 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 CD7P09564 240 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 CXCL3P19876 107 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 TAS2R45P59539 299 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 OPCMLQ14982 345 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 MORN3Q6PF18 240 aaPredicted RBP7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 Q6ZWC4 215 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 LINC00305Q7Z4B0 112 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 MGST2Q99735 147 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 C1QTNF4Q9BXJ3 329 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 NPCDR1Q9BY65 106 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 MRPL32Q9BYC8 188 aaKnown RBP7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 SLC25A22Q9H936 323 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 RPRMQ9NS64 109 aa7.67□□□□□ -1.18
TRAFD1-208ENST00000552890 TP53TG1Q9Y2A0 90 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms