RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 AP4M1O00189 453 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 HMGB3O15347 200 aaKnown RBP7.64□□□□□ -1.19
TMEM116-216ENST00000552800 COX7A2P2O60397 106 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 SCO1O75880 301 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 CD99P14209 185 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 RAB9AP51151 201 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 DEFB112Q30KQ8 113 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 UNQ5815/PRO19632Q6UWF5 114 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 Q8N2B8 174 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 OR5T1Q8NG75 326 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 Q8WTZ3 238 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 SHANK2-AS3Q9BTD1 123 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 ZNF355PQ9NSJ1 428 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 FBXL7Q9UJT9 491 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 KLF12Q9Y4X4 402 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 YTHDF2Q9Y5A9 579 aaKnown RBP7.64□□□□□ -1.19
TMEM116-216ENST00000552800 SVEP1Q4LDE5 3571 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 POLQO75417 2590 aa7.64□□□□□ -1.19
TMEM116-216ENST00000552800 A0A1B0GV50 99 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 COLCA2A8K830 154 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 ZNF727A8MUV8 499 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 H3BRN7 92 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 FOLR2P14207 255 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 GP9P14770 177 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 TAS2R60P59551 318 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 PDE6HQ13956 83 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 TIGITQ495A1 244 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 AWAT1Q58HT5 328 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 MORN5Q5VZ52 161 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 C15orf54Q8N8G6 183 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 RNF152Q8N8N0 203 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 OR4F5Q8NH21 305 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 C2CD4CQ8TF44 421 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 SMIM12Q96EX1 92 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 UHRF2Q96PU4 802 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 OR4F4Q96R69 305 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 PAXXQ9BUH6 204 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 SLC25A39Q9BZJ4 359 aaPredicted RBP7.63□□□□□ -1.19
TMEM116-216ENST00000552800 PARLQ9H300 379 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 HIGD1AQ9Y241 93 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 CSMD2Q7Z408 3487 aa7.63□□□□□ -1.19
TMEM116-216ENST00000552800 CREBBPQ92793 2442 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 TRBV6-1A0A0K0K1D8 114 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 PAX4O43316 350 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 GNG7O60262 68 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 ZNF253O75346 499 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 IGHV3-48P01763 117 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 S100A9P06702 114 aaKnown RBP7.62□□□□□ -1.19
TMEM116-216ENST00000552800 NBEAP1P0C6P0 100 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 APELAP0DMC3 54 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 IGLC2P0DOY2 106 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 HIST1H1EP10412 219 aaKnown RBP7.62□□□□□ -1.19
TMEM116-216ENST00000552800 RPL23P62829 140 aaKnown RBP7.62□□□□□ -1.19
TMEM116-216ENST00000552800 RHOGP84095 191 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 C15orf32Q32M92 178 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 C1orf194Q5T5A4 169 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 ZNF600Q6ZNG1 722 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 OR5AU1Q8NGC0 362 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 HIST1H2BAQ96A08 127 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 EEF1AKMT3Q96AZ1 226 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 ANAPC16Q96DE5 110 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 RNF125Q96EQ8 232 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 IMMP2LQ96T52 175 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 VPREB3Q9UKI3 123 aa7.62□□□□□ -1.19
TMEM116-216ENST00000552800 SOX21Q9Y651 276 aaPredicted RBP7.62□□□□□ -1.19
TMEM116-216ENST00000552800 IGHV3OR16-10A0A075B7F0 116 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.61□□□□□ -1.19
TMEM116-216ENST00000552800 TRAV5A0A0B4J249 113 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 G3V318 75 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 NUPL2O15504 423 aaKnown RBP7.61□□□□□ -1.19
TMEM116-216ENST00000552800 CD5LO43866 347 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 OR2J3O76001 311 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 IGHG4P01861 327 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 MT-ND4LP03901 98 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 ATP5G3P48201 142 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 BLCAPP62952 87 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 KRTAP1-1Q07627 177 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 KIAA0141Q14154 515 aaPredicted RBP7.61□□□□□ -1.19
TMEM116-216ENST00000552800 TMEM219Q86XT9 240 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 BCL6BQ8N143 479 aaPredicted RBP7.61□□□□□ -1.19
TMEM116-216ENST00000552800 OR1B1Q8NGR6 318 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 MYOZ3Q8TDC0 251 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 SMIM7Q9BQ49 75 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 PYGO2Q9BRQ0 406 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 PUS1Q9Y606 427 aaKnown RBP eCLIP7.61□□□□□ -1.19
TMEM116-216ENST00000552800 TEX15Q9BXT5 2789 aa7.61□□□□□ -1.19
TMEM116-216ENST00000552800 ZNF469Q96JG9 3925 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-216ENST00000552800 A0A0G2JLM5 398 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 ZNF98A6NK75 572 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 GGTLC3B5MD39 225 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 CLDN34H7C241 214 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 OR7C2O60412 319 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 EIF3GO75821 320 aaKnown RBP eCLIP7.6□□□□□ -1.19
TMEM116-216ENST00000552800 NDUFB4O95168 129 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 CLEC3BP05452 202 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 OR10J4P0C629 311 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 ORM2P19652 201 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 PSMB8P28062 276 aa7.6□□□□□ -1.19
TMEM116-216ENST00000552800 RPL15P61313 204 aaKnown RBP7.6□□□□□ -1.19
TMEM116-216ENST00000552800 SUMO1P63165 101 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms