RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 H3BNG1 76 aa9.72□□□□□ -0.85
VPS29-209ENST00000551655 RGS10O43665 173 aa9.72□□□□□ -0.85
VPS29-209ENST00000551655 TAS2R60P59551 318 aa9.72□□□□□ -0.85
VPS29-209ENST00000551655 GPR141Q7Z602 305 aa9.72□□□□□ -0.85
VPS29-209ENST00000551655 RNF182Q8N6D2 247 aa9.72□□□□□ -0.85
VPS29-209ENST00000551655 NPIPB6E9PJ23 425 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 BOLA2-SMG1P6H3BVE0 249 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 SLC25A4P12235 298 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 PSMB9P28065 219 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 CBX5P45973 191 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 AKR1C2P52895 323 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 SUPT4H1P63272 117 aaKnown RBP9.71□□□□□ -0.86
VPS29-209ENST00000551655 SFXN4Q6P4A7 337 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 C10orf67Q8IYJ2 551 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 ARRDC1Q8N5I2 433 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 OR5H2Q8NGV7 314 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 DUSP21Q9H596 190 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 NDUFB11Q9NX14 153 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 MSRB1Q9NZV6 116 aa9.71□□□□□ -0.86
VPS29-209ENST00000551655 HTR2BP41595 481 aa9.7□□□□□ -0.86
VPS29-209ENST00000551655 LYZP61626 148 aa9.7□□□□□ -0.86
VPS29-209ENST00000551655 ZNF90Q03938 601 aa9.7□□□□□ -0.86
VPS29-209ENST00000551655 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
VPS29-209ENST00000551655 LRCOL1A6NCL2 159 aa9.69□□□□□ -0.86
VPS29-209ENST00000551655 DUSP14O95147 198 aaKnown RBP9.69□□□□□ -0.86
VPS29-209ENST00000551655 CLEC2LP0C7M8 214 aa9.69□□□□□ -0.86
VPS29-209ENST00000551655 HRH1P35367 487 aa9.69□□□□□ -0.86
VPS29-209ENST00000551655 NUP62P37198 522 aaPredicted RBP9.69□□□□□ -0.86
VPS29-209ENST00000551655 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
VPS29-209ENST00000551655 OR8G2PQ6IF36 304 aa9.69□□□□□ -0.86
VPS29-209ENST00000551655 TMEM263Q8WUH6 116 aaKnown RBP9.69□□□□□ -0.86
VPS29-209ENST00000551655 TP53RKQ96S44 253 aa9.69□□□□□ -0.86
VPS29-209ENST00000551655 ANAPC10Q9UM13 185 aa9.69□□□□□ -0.86
VPS29-209ENST00000551655 TRAV8-2A0A0B4J237 113 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 PI3P19957 117 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 HLA-DMAP28067 261 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 KIR3DS1Q14943 382 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 TBCEQ15813 527 aaPredicted RBP9.68□□□□□ -0.86
VPS29-209ENST00000551655 C2orf83Q53S99 150 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 C1orf194Q5T5A4 169 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 TMEM256Q8N2U0 113 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 SLC24A4Q8NFF2 622 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 RNASEH2CQ8TDP1 164 aaKnown RBP9.68□□□□□ -0.86
VPS29-209ENST00000551655 PPP1R14BQ96C90 147 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 RSG1Q9BU20 258 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 SLC25A32Q9H2D1 315 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 HEYLQ9NQ87 328 aaPredicted RBP9.68□□□□□ -0.86
VPS29-209ENST00000551655 TPRKBQ9Y3C4 175 aa9.68□□□□□ -0.86
VPS29-209ENST00000551655 IGKV1D-37A0A075B6S9 117 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 ADAP1O75689 374 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 RLN2P04090 185 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 ZNF182P17025 639 aaPredicted RBP9.67□□□□□ -0.86
VPS29-209ENST00000551655 S100GP29377 79 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 ASIPP42127 132 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 TAS2R46P59540 309 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 RHOBP62745 196 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 MXD1Q05195 221 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 OR2F1Q13607 317 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 ZNF493Q6ZR52 646 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 Q6ZSA8 131 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 Q6ZTI0 123 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 LYSMD2Q8IV50 215 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 NTN5Q8WTR8 489 aaPredicted RBP9.67□□□□□ -0.86
VPS29-209ENST00000551655 SLC25A22Q9H936 323 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 C8orf4Q9NR00 106 aa9.67□□□□□ -0.86
VPS29-209ENST00000551655 TXNL4BQ9NX01 149 aaKnown RBP9.67□□□□□ -0.86
VPS29-209ENST00000551655 ZNF98A6NK75 572 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 HIST1H1AQ02539 215 aaPredicted RBP9.66□□□□□ -0.86
VPS29-209ENST00000551655 SP6Q3SY56 376 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 IDNKQ5T6J7 187 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 PRSS48Q7RTY5 328 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 SPARTQ8N0X7 666 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 Q8N814 137 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 PARD6GQ9BYG4 376 aaPredicted RBP9.66□□□□□ -0.86
VPS29-209ENST00000551655 DIABLOQ9NR28 239 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 PFDN2Q9UHV9 154 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 TNXBP22105 4242 aa9.66□□□□□ -0.86
VPS29-209ENST00000551655 NAT1P18440 290 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 MEOX2P50222 304 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 SPCS3P61009 180 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 TSPAN5P62079 268 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 LPCAT3Q6P1A2 487 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 ZNF738Q8NE65 137 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 IL22RA2Q969J5 263 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 LINC00467Q9BRT7 94 aa9.65□□□□□ -0.86
VPS29-209ENST00000551655 A0A0A6YYH2 397 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 A6NJ64 397 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 ZFP92A6NM28 416 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 SDC2P34741 201 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 FGL1Q08830 312 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 GAMTQ14353 236 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 TRIM16LQ309B1 348 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 ETFRF1Q6IPR1 90 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 SCXQ7RTU7 201 aa9.64□□□□□ -0.87
VPS29-209ENST00000551655 TRAV9-2A0A087WT02 112 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms