RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 TIGITQ495A1 244 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 H2BFWTQ7Z2G1 175 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 CMTM1Q8IZ96 169 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 ARRDC1Q8N5I2 433 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 OR4B1Q8NGF8 309 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 ZNF2Q9BSG1 426 aaPredicted RBP8.24□□□□□ -1.09
PTCH1-222ENST00000551425 CBY3A6NI87 242 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 TSPOP30536 169 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 SUB1P53999 127 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTCH1-222ENST00000551425 PAX9P55771 341 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 ERVFC1-1P60608 527 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 MLANAQ16655 118 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 OR4C16Q8NGL9 310 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 Q8WTZ3 238 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 IGF2BP2-AS1Q96M15 143 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 SCP2D1Q9UJQ7 156 aa8.23□□□□□ -1.09
PTCH1-222ENST00000551425 NAP1L6A6NFF2 107 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 CENPXA8MT69 81 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 RNASE2P10153 161 aaKnown RBP8.22□□□□□ -1.09
PTCH1-222ENST00000551425 OPRK1P41145 380 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 PSMB3P49720 205 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 YPEL3P61236 119 aaPredicted RBP8.22□□□□□ -1.09
PTCH1-222ENST00000551425 SPINK9Q5DT21 86 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 LPCAT3Q6P1A2 487 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 OR4D10Q8NGI6 311 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 LINC00052Q96N35 136 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 PRRT1Q99946 306 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 TMEM208Q9BTX3 173 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 MCUBQ9NWR8 336 aa8.22□□□□□ -1.09
PTCH1-222ENST00000551425 MRPS16Q9Y3D3 137 aaKnown RBP8.22□□□□□ -1.09
PTCH1-222ENST00000551425 PLAC8L1A1L4L8 177 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 ZNF705GA8MUZ8 300 aaPredicted RBP8.21□□□□□ -1.1
PTCH1-222ENST00000551425 GPR31O00270 319 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 UPK1BO75841 260 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 IGKV1-39P01597 117 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 IGKV1D-39P04432 117 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 ID1P41134 155 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 UCP3P55916 312 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 DHODHQ02127 395 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 ESRGQ1W209 222 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 SCGB2B2Q4G0G5 96 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 FAM78BQ5VT40 261 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 FAAP20Q6NZ36 180 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 LHFPL1Q86WI0 220 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 OR1S2Q8NGQ3 325 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 TERB2Q8NHR7 220 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 UHRF2Q96PU4 802 aa8.21□□□□□ -1.1
PTCH1-222ENST00000551425 A0A0J9YX75 114 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 LINC00854A0A1B0GVQ3 168 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 A8MTW9 85 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 SOCS3O14543 225 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 PRM2P04554 102 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 IL4P05112 153 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 PGAM2P15259 253 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 S100GP29377 79 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 FCN2Q15485 313 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 EBLN2Q6P2I7 272 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 SLC35G3Q8N808 338 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 OR51S1Q8NGJ8 323 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 COQ8AQ8NI60 647 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 ZFAND1Q8TCF1 268 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 RXFP4Q8TDU9 374 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 MRGPRFQ96AM1 343 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 PLA2G2DQ9UNK4 145 aa8.2□□□□□ -1.1
PTCH1-222ENST00000551425 GCSHP23434 173 aa8.19□□□□□ -1.1
PTCH1-222ENST00000551425 B2MP61769 119 aa8.19□□□□□ -1.1
PTCH1-222ENST00000551425 SURF2Q15527 256 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-222ENST00000551425 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
PTCH1-222ENST00000551425 AMTNQ6UX39 209 aa8.19□□□□□ -1.1
PTCH1-222ENST00000551425 GNPNAT1Q96EK6 184 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-222ENST00000551425 ZNF486Q96H40 463 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-222ENST00000551425 FXYD6Q9H0Q3 95 aa8.19□□□□□ -1.1
PTCH1-222ENST00000551425 A0A087WTM6 91 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 F6UB75 175 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 PLA2G10O15496 165 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 LYRM1O43325 122 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 OR10J1P30954 320 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 NUP62P37198 522 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-222ENST00000551425 DEFA1P59665 94 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 DEFA3P59666 94 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 HAMPP81172 84 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 PHLDA2Q53GA4 152 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 MZT2BQ6NZ67 158 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 PRSS54Q6PEW0 395 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 OR13C8Q8NGS7 320 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 MARCH1Q8TCQ1 289 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 SLC25A21Q9BQT8 299 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-222ENST00000551425 TMEM70Q9BUB7 260 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 GPR132Q9UNW8 380 aa8.18□□□□□ -1.1
PTCH1-222ENST00000551425 C14orf166Q9Y224 244 aaKnown RBP8.18□□□□□ -1.1
PTCH1-222ENST00000551425 TRAV26-1A0A087WT03 109 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 A0A0B4J293 547 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 ISLRO14498 428 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 CRXO43186 299 aaPredicted RBP8.17□□□□□ -1.1
PTCH1-222ENST00000551425 TOMM40O96008 361 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 INSP01308 110 aa8.17□□□□□ -1.1
PTCH1-222ENST00000551425 DNAH10OSP0CZ25 163 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms