RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CAMPP49913 170 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 ZNF138P52744 262 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 KIR2DS5Q14953 304 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 MRPL23Q16540 153 aaKnown RBP4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 SEM1Q6ZVN7 128 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 PLXDC1Q8IUK5 500 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 TEX29Q8N6K0 151 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 IL17DQ8TAD2 202 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 FGFBP3Q8TAT2 258 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 PIGCQ92535 297 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 NABP2Q9BQ15 211 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 SLC25A2Q9BXI2 301 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 OR2H1Q9GZK4 316 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 FAM234AQ9H0X4 552 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 DEC1Q9P2X7 70 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 KLF13Q9Y2Y9 288 aaPredicted RBP4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 NCOA6Q14686 2063 aaPredicted RBP4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 DOCK11Q5JSL3 2073 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 NOTCH4Q99466 2003 aa4.21□□□□□ -1.74
LSM3P2-201ENST00000551246 A0A1B0GX51 115 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 PROP1O75360 226 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 LTAP01374 205 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 ZNF688P0C7X2 276 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 GCSHP23434 173 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 UBE2D1P51668 147 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 LOXL1Q08397 574 aaPredicted RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 POU2AF1Q16633 256 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 DEFB110Q30KQ9 67 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 ZNF766Q5HY98 468 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 AMTNQ6UX39 209 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 SLC25A48Q6ZT89 311 aaKnown RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 H2BFWTQ7Z2G1 175 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 SSMEM1Q8WWF3 244 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 RLN3Q8WXF3 142 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 MMABQ96EY8 250 aaPredicted RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 ZNF714Q96N38 554 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 HSD17B10Q99714 261 aaKnown RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 MAP1LC3AQ9H492 121 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 FAM30AQ9NZY2 134 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 RALYQ9UKM9 306 aaKnown RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 AMMECR1Q9Y4X0 333 aaPredicted RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 ARHGAP21Q5T5U3 1957 aa4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 TNRC6AQ8NDV7 1962 aaKnown RBP4.2□□□□□ -1.74
LSM3P2-201ENST00000551246 IGKV1OR2-108A0A075B7D4 117 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 C5orf49A4QMS7 147 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 LINC00473A8K010 186 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 CCL16O15467 120 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 DNPH1O43598 174 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 CNIH1O95406 144 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 FAM106CPP0CH98 169 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 ZNF32P17041 273 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 CD24P25063 80 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 CD27P26842 260 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 TCTAP57738 103 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 YPEL5P62699 121 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 CACNG7P62955 275 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 ZNF816Q0VGE8 651 aaPredicted RBP4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 FAM106AQ4KMX7 169 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 TRAT1Q6PIZ9 186 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 TUSC5Q8IXB3 177 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 C11orf53Q8IXP5 236 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 LRRC75A-AS1Q8N1F1 130 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 MAPKAPK5-AS1Q8N8E1 139 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 TMEM116Q8NCL8 245 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 SLC37A2Q8TED4 501 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 DLX4Q92988 240 aaPredicted RBP4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 IFI27L1Q96BM0 104 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 FXYD5Q96DB9 178 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 ZNF414Q96IQ9 312 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 RAB9BQ9NP90 201 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 EPDR1Q9UM22 224 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 FOXA2Q9Y261 457 aaPredicted RBP4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 PCDH15Q96QU1 1955 aa4.19□□□□□ -1.74
LSM3P2-201ENST00000551246 MYO7BQ6PIF6 2116 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 A0A1W2PPI3 338 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 SMIM9A6NGZ8 99 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 FBLL1A6NHQ2 334 aaKnown RBP4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 INS-IGF2F8WCM5 200 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 H3BML4 177 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 CRLF1O75462 422 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 MOSP00540 346 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 HBDP02042 147 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 IFITM1P13164 125 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 ACP1P24666 158 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 KIR2DS2P43631 304 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 CCL11P51671 97 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 PCBD1P61457 104 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 FOXF2Q12947 444 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 GAGE2BQ13066 116 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 C3AR1Q16581 482 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 GAGE2EQ4V326 116 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 KLF17Q5JT82 389 aaPredicted RBP4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 FAM90A1Q86YD7 464 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 RFESDQ8TAC1 157 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 MYOZ3Q8TDC0 251 aa4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.18□□□□□ -1.74
LSM3P2-201ENST00000551246 PATE1Q8WXA2 126 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms