RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 CD69Q07108 199 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 HCP5Q6MZN7 132 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 CHCHD5Q9BSY4 110 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 POLR2AP24928 1970 aaKnown RBP4.08□□□□□ -1.76
APAF1-209ENST00000550527 MYLKQ15746 1914 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 SPRY3O43610 288 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 C19orf54Q5BKX5 351 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 SCARF2Q96GP6 870 aaPredicted RBP4.08□□□□□ -1.76
APAF1-209ENST00000550527 CALYQ9NYX4 217 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 C2orf70A6NJV1 201 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 LYZL6O75951 148 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 FAM104BQ5XKR9 115 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 LINC00173Q6ZV60 143 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 TMEM219Q86XT9 240 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 CARD19Q96LW7 228 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 ASCL2Q99929 193 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 TMEM243Q9BU79 118 aa4.08□□□□□ -1.76
APAF1-209ENST00000550527 TRIP12Q14669 1992 aaPredicted RBP4.08□□□□□ -1.76
APAF1-209ENST00000550527 WIPF3A6NGB9 483 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 E9PLD3 99 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 THBDP07204 575 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 CD3EP07766 207 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 CD24P25063 80 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 HERVK_113P63121 156 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 SRSF2Q01130 221 aaKnown RBP4.07□□□□□ -1.76
APAF1-209ENST00000550527 RPL39P5Q59GN2 51 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 UFSP1Q6NVU6 142 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 DUX3Q96PT4 197 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 DKK2Q9UBU2 259 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 FOXA2Q9Y261 457 aaPredicted RBP4.07□□□□□ -1.76
APAF1-209ENST00000550527 CSDC2Q9Y534 153 aaKnown RBP4.07□□□□□ -1.76
APAF1-209ENST00000550527 LTBP3Q9NS15 1303 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 PSG7Q13046 419 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 C17orf99Q6UX52 265 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 Q8N8P6 123 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 VPREB3Q9UKI3 123 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 MYO9BQ13459 2157 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 COL16A1Q07092 1604 aaPredicted RBP4.07□□□□□ -1.76
APAF1-209ENST00000550527 M0R1B8 84 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 UPK2O00526 184 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 NDUFA7O95182 113 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 ARMS2P0C7Q2 107 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 PRCDQ00LT1 54 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 RNF144BQ7Z419 303 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 TNRC6AQ8NDV7 1962 aaKnown RBP4.07□□□□□ -1.76
APAF1-209ENST00000550527 IGKV1-12A0A0C4DH73 117 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 IGKV1D-12P01611 117 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 RBM3P98179 157 aaKnown RBP4.07□□□□□ -1.76
APAF1-209ENST00000550527 Q86TA4 180 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 GTSF1Q8WW33 167 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 A0A0B4J2C4 111 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 LIFP15018 202 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 SLC25A16P16260 332 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 TMEM240Q5SV17 173 aa4.07□□□□□ -1.76
APAF1-209ENST00000550527 IGHV5-51A0A0C4DH38 117 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 PRSS46E5RG02 174 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 HLA-DRB4P13762 266 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 CFHR2P36980 270 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 HLA-DRB4X5D2U9 266 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 XIRP1Q702N8 1843 aaKnown RBP4.06□□□□□ -1.76
APAF1-209ENST00000550527 CENPVL3A0A0U1RRI6 287 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 APELAP0DMC3 54 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 DUTP33316 252 aaKnown RBP4.06□□□□□ -1.76
APAF1-209ENST00000550527 PKIGQ9Y2B9 76 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 A0A087WX48 190 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 SMKR1H3BMG3 65 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 SRD5A1P18405 259 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 C1orf147Q96MC9 270 aaPredicted RBP4.06□□□□□ -1.76
APAF1-209ENST00000550527 TP53TG3Q9ULZ0 132 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 SHANK3Q9BYB0 1731 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 CFC1BP0CG36 223 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 CFC1P0CG37 223 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 Q6Q795 121 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 BADQ92934 168 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 RNF7Q9UBF6 113 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 LINC00527Q9UJ94 153 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 CASP8AP2Q9UKL3 1982 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 PDE4DIPQ5VU43 2346 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 IGKV1-27A0A075B6S5 117 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 IGHV3OR15-7A0A075B7D8 119 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 SH2D1AO60880 128 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 NPPCP23582 126 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 SCN3AQ9NY46 2000 aa4.06□□□□□ -1.76
APAF1-209ENST00000550527 A0A1B0GX51 115 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 C21orf140B9A014 251 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 RHODO00212 210 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 TNFAIP6P98066 277 aaPredicted RBP4.05□□□□□ -1.76
APAF1-209ENST00000550527 MRPL51Q4U2R6 128 aaKnown RBP4.05□□□□□ -1.76
APAF1-209ENST00000550527 MRPL35Q9NZE8 188 aaKnown RBP4.05□□□□□ -1.76
APAF1-209ENST00000550527 DOCK4Q8N1I0 1966 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 TRAV25A0A0B4J276 109 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 IGHV3-48P01763 117 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 LINC00694P0DN24 101 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 Q6ZS92 163 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 C16orf92Q96LL3 132 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 C20orf173Q96LM9 149 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 PEMTQ9UBM1 199 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 BRWD3Q6RI45 1802 aa4.05□□□□□ -1.76
APAF1-209ENST00000550527 M0R381 172 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms