RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 WDR12Q9GZL7 423 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-209ENST00000550477 A0A1B0GVY2 172 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 ANKRD20A5PA0PJZ0 165 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 RPP30P78346 268 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 ZNF90Q03938 601 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 RRN3P1Q2M238 152 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 RNF212Q495C1 297 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 GGNBP1Q5YKI7 109 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 LYZL2Q7Z4W2 148 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 SCRT1Q9BWW7 348 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 RSL24D1Q9UHA3 163 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 HECTD4Q9Y4D8 3996 aa16.48■□□□□ 0.23
SMARCD1-209ENST00000550477 GALR1P47211 349 aa16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 PAX9P55771 341 aa16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 C16orf92Q96LL3 132 aa16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 TRGV9Q99603 122 aa16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 TMEM208Q9BTX3 173 aa16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 MAGT1Q9H0U3 335 aa16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 PRR13Q9NZ81 148 aa16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 PAIP2BQ9ULR5 123 aaKnown RBP16.47■□□□□ 0.23
SMARCD1-209ENST00000550477 DUXBA0A1W2PPF3 345 aa16.46■□□□□ 0.23
SMARCD1-209ENST00000550477 RTL8CO15255 209 aa16.46■□□□□ 0.23
SMARCD1-209ENST00000550477 MED6O75586 246 aa16.46■□□□□ 0.23
SMARCD1-209ENST00000550477 HTN3P15516 51 aa16.46■□□□□ 0.23
SMARCD1-209ENST00000550477 ZNF79Q15937 498 aa16.46■□□□□ 0.23
SMARCD1-209ENST00000550477 FAM78BQ5VT40 261 aa16.46■□□□□ 0.23
SMARCD1-209ENST00000550477 LOC102723971A0A1B0GUV8 181 aa16.45■□□□□ 0.22
SMARCD1-209ENST00000550477 FAUP35544 74 aaKnown RBP16.45■□□□□ 0.22
SMARCD1-209ENST00000550477 DAD1P61803 113 aa16.45■□□□□ 0.22
SMARCD1-209ENST00000550477 OR2F1Q13607 317 aa16.45■□□□□ 0.22
SMARCD1-209ENST00000550477 ZNF709Q8N972 641 aa16.45■□□□□ 0.22
SMARCD1-209ENST00000550477 MRPS26Q9BYN8 205 aaKnown RBP16.45■□□□□ 0.22
SMARCD1-209ENST00000550477 SLC35B3Q9H1N7 401 aa16.45■□□□□ 0.22
SMARCD1-209ENST00000550477 IGLV2-18A0A075B6J9 118 aa16.44■□□□□ 0.22
SMARCD1-209ENST00000550477 IGKV1D-37A0A075B6S9 117 aa16.44■□□□□ 0.22
SMARCD1-209ENST00000550477 SOCS3O14543 225 aa16.44■□□□□ 0.22
SMARCD1-209ENST00000550477 DEFB1P60022 68 aa16.44■□□□□ 0.22
SMARCD1-209ENST00000550477 CIB3Q96Q77 187 aaPredicted RBP16.44■□□□□ 0.22
SMARCD1-209ENST00000550477 DOK5Q9P104 306 aa16.44■□□□□ 0.22
SMARCD1-209ENST00000550477 YTHDF2Q9Y5A9 579 aaKnown RBP16.44■□□□□ 0.22
SMARCD1-209ENST00000550477 A0A0J9YX75 114 aa16.43■□□□□ 0.22
SMARCD1-209ENST00000550477 SMIM18P0DKX4 95 aa16.43■□□□□ 0.22
SMARCD1-209ENST00000550477 SPCS2Q15005 226 aa16.43■□□□□ 0.22
SMARCD1-209ENST00000550477 GSG1LQ6UXU4 331 aa16.43■□□□□ 0.22
SMARCD1-209ENST00000550477 SLC45A2Q9UMX9 530 aa16.43■□□□□ 0.22
SMARCD1-209ENST00000550477 TMED3Q9Y3Q3 217 aa16.43■□□□□ 0.22
SMARCD1-209ENST00000550477 GPR82Q96P67 336 aa16.42■□□□□ 0.22
SMARCD1-209ENST00000550477 SLC25A22Q9H936 323 aa16.42■□□□□ 0.22
SMARCD1-209ENST00000550477 CCDC59Q9P031 241 aaKnown RBP16.42■□□□□ 0.22
SMARCD1-209ENST00000550477 F6UB75 175 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 DUSP14O95147 198 aaKnown RBP16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 SLC25A6P12236 298 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 B2MP61769 119 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 TMEM128Q5BJH2 165 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 C1orf158Q8N1D5 194 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 C15orf53Q8NAA6 179 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 BPIFCQ8NFQ6 507 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 OR1B1Q8NGR6 318 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 RAB2BQ8WUD1 216 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 MUC4Q99102 2169 aa16.41■□□□□ 0.22
SMARCD1-209ENST00000550477 IAPPP10997 89 aa16.4■□□□□ 0.22
SMARCD1-209ENST00000550477 FAM3BP58499 235 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-209ENST00000550477 C1orf134Q5TEV5 83 aa16.4■□□□□ 0.22
SMARCD1-209ENST00000550477 THAP8Q8NA92 274 aa16.4■□□□□ 0.22
SMARCD1-209ENST00000550477 OR4D5Q8NGN0 318 aa16.4■□□□□ 0.22
SMARCD1-209ENST00000550477 IGF2BP2-AS1Q96M15 143 aa16.4■□□□□ 0.22
SMARCD1-209ENST00000550477 RSG1Q9BU20 258 aa16.4■□□□□ 0.22
SMARCD1-209ENST00000550477 FABP12A6NFH5 140 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 AP3S2P59780 193 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 Q6ZR54 194 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 TMED4Q7Z7H5 227 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 BCL7BQ9BQE9 202 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 ATG101Q9BSB4 218 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 TMEM147Q9BVK8 224 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 PLA2G2EQ9NZK7 142 aa16.39■□□□□ 0.21
SMARCD1-209ENST00000550477 ZNF98A6NK75 572 aa16.38■□□□□ 0.21
SMARCD1-209ENST00000550477 NOL3O60936 208 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-209ENST00000550477 PITX3O75364 302 aa16.38■□□□□ 0.21
SMARCD1-209ENST00000550477 ALDH3B2P48448 385 aa16.38■□□□□ 0.21
SMARCD1-209ENST00000550477 TMEM88Q6PEY1 159 aa16.38■□□□□ 0.21
SMARCD1-209ENST00000550477 KIAA1109Q2LD37 5005 aa16.38■□□□□ 0.21
SMARCD1-209ENST00000550477 ORM2P19652 201 aa16.37■□□□□ 0.21
SMARCD1-209ENST00000550477 VAMP1P23763 118 aa16.37■□□□□ 0.21
SMARCD1-209ENST00000550477 DYNC2LI1Q8TCX1 351 aa16.37■□□□□ 0.21
SMARCD1-209ENST00000550477 SLC25A32Q9H2D1 315 aa16.37■□□□□ 0.21
SMARCD1-209ENST00000550477 LYRM9A8MSI8 78 aa16.36■□□□□ 0.21
SMARCD1-209ENST00000550477 SYNGR2O43760 224 aa16.36■□□□□ 0.21
SMARCD1-209ENST00000550477 INSP01308 110 aa16.36■□□□□ 0.21
SMARCD1-209ENST00000550477 TMBIM6P55061 237 aa16.36■□□□□ 0.21
SMARCD1-209ENST00000550477 AKR1C1Q04828 323 aa16.36■□□□□ 0.21
SMARCD1-209ENST00000550477 S100A7AQ86SG5 101 aa16.36■□□□□ 0.21
SMARCD1-209ENST00000550477 LRTM2Q8N967 370 aa16.36■□□□□ 0.21
SMARCD1-209ENST00000550477 IGKV1OR2-108A0A075B7D4 117 aa16.35■□□□□ 0.21
SMARCD1-209ENST00000550477 TOMM5Q8N4H5 51 aa16.35■□□□□ 0.21
SMARCD1-209ENST00000550477 SLC25A21Q9BQT8 299 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-209ENST00000550477 PPP1R14DQ9NXH3 145 aa16.35■□□□□ 0.21
SMARCD1-209ENST00000550477 A8MTW9 85 aa16.34■□□□□ 0.21
SMARCD1-209ENST00000550477 WRBO00258 174 aa16.34■□□□□ 0.21
SMARCD1-209ENST00000550477 TNFSF8P32971 234 aa16.34■□□□□ 0.21
SMARCD1-209ENST00000550477 RAP2BP61225 183 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms