RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 IGF2BP2-AS1Q96M15 143 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 ATG101Q9BSB4 218 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 TMEM56-RWDD3S4R434 201 aa6.93□□□□□ -1.3
TRAFD1-207ENST00000550051 IGKV1D-37A0A075B6S9 117 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 LYRM9A8MSI8 78 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 SNRPGP15A8MWD9 76 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 RAB3DO95716 219 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 TAS2R19P59542 299 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 SURF2Q15527 256 aaPredicted RBP6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 AMTNQ6UX39 209 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 COQ8AQ8NI60 647 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 C7orf50Q9BRJ6 194 aaKnown RBP6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 MAGT1Q9H0U3 335 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 NAA60Q9H7X0 242 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 RPRMQ9NS64 109 aa6.92□□□□□ -1.3
TRAFD1-207ENST00000550051 CRYM-AS1A6NIL9 109 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 F6UB75 175 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 TNFAIP8O95379 198 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 FABP1P07148 127 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 SULT1A3P0DMM9 295 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 SULT1A4P0DMN0 295 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 TSPOP30536 169 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 MEOX2P50222 304 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 B2MP61769 119 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 NCS1P62166 190 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 ZNF90Q03938 601 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 GAMTQ14353 236 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 MEF2DQ14814 521 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 SCGB2B2Q4G0G5 96 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 TMEM268Q5VZI3 342 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 STEAP1BQ6NZ63 245 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 MZT2AQ6P582 158 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 OR8I2Q8N0Y5 310 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 PBDC1Q9BVG4 233 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 DOK5Q9P104 306 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 HSPB7Q9UBY9 170 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 GPR132Q9UNW8 380 aa6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 C14orf166Q9Y224 244 aaKnown RBP6.91□□□□□ -1.3
TRAFD1-207ENST00000550051 A0A087WXM4 84 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 ZFP92A6NM28 416 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 FAM25AB3EWG3 89 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 FAM25CB3EWG5 89 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 FAM25GB3EWG6 89 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 CCL18P55774 89 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 VBP1P61758 197 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 SSBP1Q04837 148 aaKnown RBP6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 RNASE12Q5GAN4 147 aaKnown RBP6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 GPR107Q5VW38 600 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 LGI3Q8N145 548 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 RNF141Q8WVD5 230 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 C20orf173Q96LM9 149 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 FUNDC2Q9BWH2 189 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 VCX3AQ9NNX9 186 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 SCRT2Q9NQ03 307 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 KCNIP3Q9Y2W7 256 aa6.9□□□□□ -1.3
TRAFD1-207ENST00000550051 CBY3A6NI87 242 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 GABARAPH6UMI1 98 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 CRXO43186 299 aaPredicted RBP6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 GABARAPO95166 117 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 CFDP00746 253 aaPredicted RBP6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 CCR6P51684 374 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 GPR141Q7Z602 305 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 OR4D5Q8NGN0 318 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 DTD1Q8TEA8 209 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 AP3S1Q92572 193 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 TRGV9Q99603 122 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 TMEM208Q9BTX3 173 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 RBKSQ9H477 322 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 EXTL2Q9UBQ6 330 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 LINC00588Q9Y4M8 146 aa6.89□□□□□ -1.31
TRAFD1-207ENST00000550051 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 ZNF705GA8MUZ8 300 aaPredicted RBP6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 F5H768 121 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 DUSP14O95147 198 aaKnown RBP6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 PRM2P04554 102 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 DEFB130BP0DP73 79 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 DEFB130AP0DP74 79 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 ZNF182P17025 639 aaPredicted RBP6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 LYZP61626 148 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 MRPS10P82664 201 aaKnown RBP6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 SMCO1Q147U7 214 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 GGNBP1Q5YKI7 109 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 THAP8Q8NA92 274 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 SLC35E1Q96K37 410 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 RSG1Q9BU20 258 aa6.88□□□□□ -1.31
TRAFD1-207ENST00000550051 LRP1BQ9NZR2 4599 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 IGKV1OR2-108A0A075B7D4 117 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 A0A0B4J2A0 478 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 ZNF98A6NK75 572 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 DISC1C4P0D8 188 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 NUDT3O95989 172 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 ATP5G1P05496 136 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 AZU1P20160 251 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 BTF3P20290 206 aaKnown RBP6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 GALR1P47211 349 aa6.87□□□□□ -1.31
TRAFD1-207ENST00000550051 ATP5G3P48201 142 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms