RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PATE2Q6UY27 113 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 LINC00305Q7Z4B0 112 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 REC114Q7Z4M0 266 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 C11orf44Q8N8P7 122 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 MBD3L1Q8WWY6 194 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 RAB24Q969Q5 203 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 ZNF414Q96IQ9 312 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 METTL26Q96S19 204 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
LETMD1-220ENST00000549686 NF1P21359 2839 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 TRAV1-1A0A0B4J248 108 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 K7EMT4 169 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 LGALS9O00182 355 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 NMBP08949 121 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 FHITP49789 147 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 USF2Q15853 346 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-220ENST00000549686 C1QL4Q86Z23 238 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 STXBP6Q8NFX7 210 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 TMEM158Q8WZ71 300 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 NARS2Q96I59 477 aaKnown RBP13.35□□□□□ -0.27
LETMD1-220ENST00000549686 SHANK2-AS3Q9BTD1 123 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 SLC25A22Q9H936 323 aa13.35□□□□□ -0.27
LETMD1-220ENST00000549686 SEPSECSQ9HD40 501 aaKnown RBP13.35□□□□□ -0.27
LETMD1-220ENST00000549686 TECRQ9NZ01 308 aaKnown RBP13.35□□□□□ -0.27
LETMD1-220ENST00000549686 C8orf88P0DMB2 117 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 NPPCP23582 126 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 HOXD3P31249 432 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-220ENST00000549686 ZNF726P1Q15940 193 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 KHDC3LQ587J8 217 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 C18orf65Q6ZTR6 163 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 C8orf86Q6ZUL3 223 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 OR11H1Q8NG94 326 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 C20orf24Q9BUV8 137 aa13.34□□□□□ -0.27
LETMD1-220ENST00000549686 SLC25A39Q9BZJ4 359 aaPredicted RBP13.34□□□□□ -0.27
LETMD1-220ENST00000549686 NIPBLQ6KC79 2804 aaeCLIP13.34□□□□□ -0.27
LETMD1-220ENST00000549686 MAP1LC3B2A6NCE7 125 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 H3BRN7 92 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 STAG3L2P0CL84 134 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 STAG3L3P0CL85 134 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 CRYBB3P26998 211 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 BMI1P35226 326 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 FHL3Q13643 280 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 PQLC2Q6ZP29 291 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 LYPD6BQ8NI32 183 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 MAP1LC3BQ9GZQ8 125 aa13.33□□□□□ -0.28
LETMD1-220ENST00000549686 DAZ1Q9NQZ3 744 aaKnown RBP13.33□□□□□ -0.28
LETMD1-220ENST00000549686 A0A1W2PRX2 142 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 A0A1W2PS18 150 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 ZNF320A2RRD8 509 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 A8MWP6 167 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 CCL24O00175 119 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 CXorf1O96002 111 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 MYCNOSP40205 109 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 KRTAP10-3P60369 221 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 KLF5Q13887 457 aaPredicted RBP13.32□□□□□ -0.28
LETMD1-220ENST00000549686 C1orf194Q5T5A4 169 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 LCN15Q6UWW0 184 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 UNQ9165/PRO28630Q6UXU0 137 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 MIR17HGQ75NE6 70 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 GPR82Q96P67 336 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 UHRF2Q96PU4 802 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 CITED1Q99966 193 aa13.32□□□□□ -0.28
LETMD1-220ENST00000549686 ZNF98A6NK75 572 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 ADARB2-AS1A8MUL3 147 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 PPT1P50897 306 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 DEFB136Q30KP8 78 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 GRAMD2BQ96HH9 432 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 RAX2Q96IS3 184 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 TMEM231Q9H6L2 316 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 TMEM14CQ9P0S9 112 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 PEMTQ9UBM1 199 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 U3KQE9 123 aa13.31□□□□□ -0.28
LETMD1-220ENST00000549686 SYNJ2BPP57105 145 aa13.3□□□□□ -0.28
LETMD1-220ENST00000549686 MARC2Q969Z3 335 aa13.3□□□□□ -0.28
LETMD1-220ENST00000549686 SCRT1Q9BWW7 348 aa13.3□□□□□ -0.28
LETMD1-220ENST00000549686 HRH4Q9H3N8 390 aa13.3□□□□□ -0.28
LETMD1-220ENST00000549686 BUB3O43684 328 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 OR7C2O60412 319 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 RPL7P18124 248 aaKnown RBP13.29□□□□□ -0.28
LETMD1-220ENST00000549686 PSMB3P49720 205 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 PMS2P11Q13670 270 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 NSUN5P1Q3KNT7 163 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 SSX7Q7RTT5 188 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 FAM167A-AS1Q96KT0 104 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 ZNF747Q9BV97 191 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 SLC25A2Q9BXI2 301 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 TMEM167BQ9NRX6 74 aa13.29□□□□□ -0.28
LETMD1-220ENST00000549686 IGHV3OR16-8A0A075B7F1 116 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 IGHV7-4-1A0A0J9YVY3 117 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 ARL14EPLP0DKL9 152 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 SLURP1P55000 103 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 IL34Q6ZMJ4 242 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 OR4F17Q8NGA8 305 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 PCNPQ8WW12 178 aaKnown RBP13.28□□□□□ -0.28
LETMD1-220ENST00000549686 OR4F4Q96R69 305 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 PAXXQ9BUH6 204 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms