RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 SCGB2B2Q4G0G5 96 aa11.84□□□□□ -0.51
VPS29-204ENST00000548259 NMSQ5H8A3 153 aa11.84□□□□□ -0.51
VPS29-204ENST00000548259 OR13C8Q8NGS7 320 aa11.84□□□□□ -0.51
VPS29-204ENST00000548259 CD3DP04234 171 aa11.83□□□□□ -0.52
VPS29-204ENST00000548259 OR5AC1P0C628 307 aa11.83□□□□□ -0.52
VPS29-204ENST00000548259 INAFM2P0DMQ5 153 aa11.83□□□□□ -0.52
VPS29-204ENST00000548259 DNAH5Q8TE73 4624 aa11.83□□□□□ -0.52
VPS29-204ENST00000548259 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
VPS29-204ENST00000548259 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 A8MTW9 85 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 CFDP00746 253 aaPredicted RBP11.82□□□□□ -0.52
VPS29-204ENST00000548259 SULT1A3P0DMM9 295 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 SULT1A4P0DMN0 295 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 ZNF182P17025 639 aaPredicted RBP11.82□□□□□ -0.52
VPS29-204ENST00000548259 TGFBR1P36897 503 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
VPS29-204ENST00000548259 LSM3P62310 102 aaKnown RBP11.82□□□□□ -0.52
VPS29-204ENST00000548259 TMEM268Q5VZI3 342 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 LGI3Q8N145 548 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 RNF141Q8WVD5 230 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 TMEM170AQ8WVE7 144 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 Q9H3A6 140 aa11.82□□□□□ -0.52
VPS29-204ENST00000548259 EREGO14944 169 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 ZNF90Q03938 601 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 SPINK13Q1W4C9 94 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 RNASE12Q5GAN4 147 aaKnown RBP11.81□□□□□ -0.52
VPS29-204ENST00000548259 AMTNQ6UX39 209 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 SELENOHQ8IZQ5 122 aaKnown RBP11.81□□□□□ -0.52
VPS29-204ENST00000548259 TMEM256Q8N2U0 113 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 OR10J6PQ8NGY7 276 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 MARCH1Q8TCQ1 289 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 GLYATL2Q8WU03 294 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 C15orf40Q8WUR7 153 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 NAA60Q9H7X0 242 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 VCX3AQ9NNX9 186 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 PPP1R14DQ9NXH3 145 aa11.81□□□□□ -0.52
VPS29-204ENST00000548259 FAM25AB3EWG3 89 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 FAM25CB3EWG5 89 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 FAM25GB3EWG6 89 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 M0R2Z0 102 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 ADAP1O75689 374 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 RAB3DO95716 219 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 ELK1P19419 428 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 CNN1P51911 297 aaKnown RBP11.8□□□□□ -0.52
VPS29-204ENST00000548259 TAS2R19P59542 299 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 KRTAP10-2P60368 255 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 DTD1Q8TEA8 209 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
VPS29-204ENST00000548259 GPR82Q96P67 336 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 LINC01587Q99440 93 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 MTFP1Q9UDX5 166 aa11.8□□□□□ -0.52
VPS29-204ENST00000548259 TIMM8BQ9Y5J9 83 aaPredicted RBP11.8□□□□□ -0.52
VPS29-204ENST00000548259 GAMTQ14353 236 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 GGNBP1Q5YKI7 109 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 MZT2AQ6P582 158 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 OR11H7Q8NGC8 314 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 OR1B1Q8NGR6 318 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 C16orf74Q96GX8 76 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 RSG1Q9BU20 258 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 SLC25A22Q9H936 323 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 PGPEP1Q9NXJ5 209 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 SLC45A2Q9UMX9 530 aa11.79□□□□□ -0.52
VPS29-204ENST00000548259 HPGDSO60760 199 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 TAS2R60P59551 318 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 OR2F1Q13607 317 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 MEF2DQ14814 521 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 SURF2Q15527 256 aaPredicted RBP11.78□□□□□ -0.52
VPS29-204ENST00000548259 GPR107Q5VW38 600 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 ZNF493Q6ZR52 646 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 TMEM144Q7Z5S9 345 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 TMEM229BQ8NBD8 167 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 OR4D5Q8NGN0 318 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 OR52I2Q8NH67 350 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 LHFPL5Q8TAF8 219 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 FRZBQ92765 325 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 C20orf173Q96LM9 149 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 TRGV9Q99603 122 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 KCNIP3Q9Y2W7 256 aa11.78□□□□□ -0.52
VPS29-204ENST00000548259 BOLA2-SMG1P6H3BVE0 249 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 CRXO43186 299 aaPredicted RBP11.77□□□□□ -0.53
VPS29-204ENST00000548259 HTN1P15515 57 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 M6PRP20645 277 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 CCR6P51684 374 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 RAB11AP62491 216 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 DLK1P80370 383 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 OR5I1Q13606 314 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 FCN2Q15485 313 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 STEAP1BQ6NZ63 245 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 BAP18Q8IXM2 172 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 UPK3BQ9BT76 320 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.53
VPS29-204ENST00000548259 IGKV1D-37A0A075B6S9 117 aa11.76□□□□□ -0.53
VPS29-204ENST00000548259 PIGBOS1A0A0B4J2F0 54 aa11.76□□□□□ -0.53
VPS29-204ENST00000548259 PRM2P04554 102 aa11.76□□□□□ -0.53
VPS29-204ENST00000548259 RHOBP62745 196 aa11.76□□□□□ -0.53
VPS29-204ENST00000548259 ZNF738Q8NE65 137 aa11.76□□□□□ -0.53
VPS29-204ENST00000548259 OR4D10Q8NGI6 311 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms