RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 COX7A2P2O60397 106 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 CLEC3BP05452 202 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 CTSGP08311 255 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 CCL20P78556 96 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 UBE2E2Q96LR5 201 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 CCDC140Q96MF4 163 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 PFDN5Q99471 154 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 RNF2Q99496 336 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 NOTCH3Q9UM47 2321 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 ELOA3CA0A087WX78 387 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 I3L521 148 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 HMGB3O15347 200 aaKnown RBP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 NUPL2O15504 423 aaKnown RBP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 ATP6V1G1O75348 118 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 EIF3GO75821 320 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 OR5G3P0C626 314 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 GPR183P32249 361 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 FGF8P55075 233 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 PLP1P60201 277 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 FAM78BQ5VT40 261 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 C10orf113Q5VZT2 155 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 CLEC19AQ6UXS0 136 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 C1QL4Q86Z23 238 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 EIF4E3Q8N5X7 224 aaKnown RBP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 OR51G1Q8NGK1 321 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 Q8WTZ3 238 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 TMEM37Q8WXS4 190 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 CITED4Q96RK1 184 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 SEPSECSQ9HD40 501 aaKnown RBP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 DOK5Q9P104 306 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 FUT9Q9Y231 359 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 CCL24O00175 119 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 HYPMO75409 117 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 ORM2P19652 201 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 SPATA31B1PQ5VZV4 182 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 PATE2Q6UY27 113 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 OR1B1Q8NGR6 318 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 CHRDL1Q9BU40 450 aa13.36□□□□□ -0.27
HDAC7-227ENST00000548080 MRPL32Q9BYC8 188 aaKnown RBP13.36□□□□□ -0.27
HDAC7-227ENST00000548080 ANKRD34BA5PLL1 514 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 CD33P20138 364 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 ADMP35318 185 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 LYZP61626 148 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 MIR17HGQ75NE6 70 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 LINC00482Q8N8I6 264 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 OR11H1Q8NG94 326 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 NOTCH1P46531 2555 aa13.35□□□□□ -0.27
HDAC7-227ENST00000548080 WI2-2373I1.2A0A1W2PRP0 233 aa13.34□□□□□ -0.27
HDAC7-227ENST00000548080 TGOLN2O43493 480 aa13.34□□□□□ -0.27
HDAC7-227ENST00000548080 LGALS1P09382 135 aaKnown RBP13.34□□□□□ -0.27
HDAC7-227ENST00000548080 STAG3L2P0CL84 134 aa13.34□□□□□ -0.27
HDAC7-227ENST00000548080 STAG3L3P0CL85 134 aa13.34□□□□□ -0.27
HDAC7-227ENST00000548080 FAM210AQ96ND0 272 aa13.34□□□□□ -0.27
HDAC7-227ENST00000548080 TECRQ9NZ01 308 aaKnown RBP13.34□□□□□ -0.27
HDAC7-227ENST00000548080 IGHV4OR15-8A0A075B7B6 117 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 A0A087WW49 117 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 G3V4G9 280 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 OR2C1O95371 312 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 CXorf1O96002 111 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 IGLL1P15814 213 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 MYCNOSP40205 109 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 ZNF343Q6P1L6 599 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 UQCC3Q6UW78 93 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 ZNF600Q6ZNG1 722 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 OR1N2Q8NGR9 330 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 PBDC1Q9BVG4 233 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 HIGD1AQ9Y241 93 aa13.33□□□□□ -0.28
HDAC7-227ENST00000548080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.32□□□□□ -0.28
HDAC7-227ENST00000548080 TRBV12-3P01733 135 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 IL4P05112 153 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 C8orf88P0DMB2 117 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 SLURP1P55000 103 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 TAS2R45P59539 299 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 PMS2P11Q13670 270 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 GUK1Q16774 197 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 OXLD1Q5BKU9 147 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 RNF125Q96EQ8 232 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 TMPRSS5Q9H3S3 457 aa13.32□□□□□ -0.28
HDAC7-227ENST00000548080 MRPL27Q9P0M9 148 aaKnown RBP13.32□□□□□ -0.28
HDAC7-227ENST00000548080 RBFOX3A6NFN3 312 aa13.31□□□□□ -0.28
HDAC7-227ENST00000548080 ARL14EPLP0DKL9 152 aa13.31□□□□□ -0.28
HDAC7-227ENST00000548080 FAM209BQ5JX69 171 aa13.31□□□□□ -0.28
HDAC7-227ENST00000548080 LINC00305Q7Z4B0 112 aa13.31□□□□□ -0.28
HDAC7-227ENST00000548080 UHRF2Q96PU4 802 aa13.31□□□□□ -0.28
HDAC7-227ENST00000548080 SCRT1Q9BWW7 348 aa13.31□□□□□ -0.28
HDAC7-227ENST00000548080 GNG13Q9P2W3 67 aa13.31□□□□□ -0.28
HDAC7-227ENST00000548080 IFNA1P01562 189 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 ARL3P36405 182 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 SRSF3P84103 164 aaKnown RBP13.3□□□□□ -0.28
HDAC7-227ENST00000548080 RELQ04864 619 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-227ENST00000548080 FHL3Q13643 280 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 PEA15Q15121 130 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 HAGHQ16775 308 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 KHDC3LQ587J8 217 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 TOR2AQ5JU69 321 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 IQCF2Q8IXL9 164 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 DPF1Q92782 380 aa13.3□□□□□ -0.28
HDAC7-227ENST00000548080 EIF5A2Q9GZV4 153 aaKnown RBP13.3□□□□□ -0.28
HDAC7-227ENST00000548080 PUS1Q9Y606 427 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDAC7-227ENST00000548080 TRAV5A0A0B4J249 113 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms