RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 NUP62P37198 522 aaPredicted RBP9.58□□□□□ -0.88
CPSF6-204ENST00000547486 GGNBP1Q5YKI7 109 aa9.58□□□□□ -0.88
CPSF6-204ENST00000547486 ZNF705AQ6ZN79 300 aaPredicted RBP9.58□□□□□ -0.88
CPSF6-204ENST00000547486 RBM38Q9H0Z9 239 aaKnown RBP9.58□□□□□ -0.88
CPSF6-204ENST00000547486 PFDN2Q9UHV9 154 aa9.58□□□□□ -0.88
CPSF6-204ENST00000547486 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 CCDC160A6NGH7 325 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 ZNF705FA8MVS1 300 aaPredicted RBP9.57□□□□□ -0.88
CPSF6-204ENST00000547486 F6UB75 175 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 MED6O75586 246 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 FABP1P07148 127 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 ZNF705DP0CH99 300 aaPredicted RBP9.57□□□□□ -0.88
CPSF6-204ENST00000547486 ZNF705BP0CI00 300 aaPredicted RBP9.57□□□□□ -0.88
CPSF6-204ENST00000547486 GATA2P23769 480 aaPredicted RBP9.57□□□□□ -0.88
CPSF6-204ENST00000547486 S100A5P33763 92 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 PSMB3P49720 205 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 BAK1Q16611 211 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 SPANXN5Q5MJ07 72 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 FOXI2Q6ZQN5 318 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 OR8I2Q8N0Y5 310 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 CENPSQ8N2Z9 138 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 DEDD2Q8WXF8 326 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 C20orf173Q96LM9 149 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 SRRQ9GZT4 340 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 SLC35B3Q9H1N7 401 aa9.57□□□□□ -0.88
CPSF6-204ENST00000547486 C9orf170A2RU37 121 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 H3BP45 60 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 ADAP1O75689 374 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 ID1P41134 155 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 ID3Q02535 119 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 OR4B1Q8NGF8 309 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 PPP1R14BQ96C90 147 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 CLUHP3Q96NS8 147 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 CIB3Q96Q77 187 aaPredicted RBP9.56□□□□□ -0.88
CPSF6-204ENST00000547486 NEU1Q99519 415 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 FLVCR2Q9UPI3 526 aa9.56□□□□□ -0.88
CPSF6-204ENST00000547486 IGHV3OR16-12A0A075B7B8 117 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 ZNF98A6NK75 572 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 ISLRO14498 428 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 ORM2P19652 201 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 EMP1P54849 157 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 POLR2GP62487 172 aaKnown RBP eCLIP9.55□□□□□ -0.88
CPSF6-204ENST00000547486 RPP30P78346 268 aaKnown RBP9.55□□□□□ -0.88
CPSF6-204ENST00000547486 FAM78BQ5VT40 261 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 COQ8AQ8NI60 647 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 RSG1Q9BU20 258 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 RNF126Q9BV68 326 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 SLC25A32Q9H2D1 315 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
CPSF6-204ENST00000547486 A0A0J9YX75 114 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 NDUFB6O95139 128 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 CFDP00746 253 aaPredicted RBP9.54□□□□□ -0.88
CPSF6-204ENST00000547486 PAX9P55771 341 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 PSG9Q00887 426 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 IGFL4Q6B9Z1 124 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 SDHCQ99643 169 aaPredicted RBP9.54□□□□□ -0.88
CPSF6-204ENST00000547486 SLC25A22Q9H936 323 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 STRAPQ9Y3F4 350 aaKnown RBP9.54□□□□□ -0.88
CPSF6-204ENST00000547486 HERC2O95714 4834 aa9.54□□□□□ -0.88
CPSF6-204ENST00000547486 LINC00854A0A1B0GVQ3 168 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 PMS2P5A8MQ11 134 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 SPART-AS1P0CW21 52 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 UBE2MP61081 183 aaKnown RBP9.53□□□□□ -0.88
CPSF6-204ENST00000547486 SPANXN2Q5MJ10 180 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 EBLN2Q6P2I7 272 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 ACOT7LQ6ZUV0 252 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 OR4D5Q8NGN0 318 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 OR1B1Q8NGR6 318 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 C16orf92Q96LL3 132 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 SLC45A2Q9UMX9 530 aa9.53□□□□□ -0.88
CPSF6-204ENST00000547486 TRAV8-2A0A0B4J237 113 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 CCNKO75909 580 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 AMBPP02760 352 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 OR4E1P0C645 316 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 ANXA7P20073 488 aaKnown RBP9.52□□□□□ -0.89
CPSF6-204ENST00000547486 BTCP35070 178 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 GALR1P47211 349 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 AKR1C1Q04828 323 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 AMTNQ6UX39 209 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 TMEM144Q7Z5S9 345 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 BPIFCQ8NFQ6 507 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 RPRMQ9NS64 109 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 PSENENQ9NZ42 101 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 DOK5Q9P104 306 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 DKK2Q9UBU2 259 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 RFNGQ9Y644 331 aa9.52□□□□□ -0.89
CPSF6-204ENST00000547486 TMEM189A5PLL7 270 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 NAP1L6A6NFF2 107 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 A8MTW9 85 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 ZNF701M0R085 212 aaPredicted RBP9.51□□□□□ -0.89
CPSF6-204ENST00000547486 PRM2P04554 102 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 MEOX2P50222 304 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 FAM222AQ5U5X8 452 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
CPSF6-204ENST00000547486 RNF182Q8N6D2 247 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms