RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ACTR3CQ9C0K3 210 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 MRPL27Q9P0M9 148 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 DOK5Q9P104 306 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 RFNGQ9Y644 331 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 CUBNO60494 3623 aa12.15□□□□□ -0.46
TRAFD1-203ENST00000547063 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 BMI1P35226 326 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 RAB2AP61019 212 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 FHL3Q13643 280 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 KLF5Q13887 457 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 DEFB136Q30KP8 78 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 OR4F17Q8NGA8 305 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 RCC1LQ96I51 464 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 OR4F4Q96R69 305 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 DAZ1Q9NQZ3 744 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 RPRMQ9NS64 109 aa12.14□□□□□ -0.47
TRAFD1-203ENST00000547063 A8MWP6 167 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 SEC14L6B5MCN3 397 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 CDC34P49427 236 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 RIPPLY3P57055 190 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 TAS2R45P59539 299 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 BLOC1S1P78537 153 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 USF2Q15853 346 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 FAM78BQ5VT40 261 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 SAT2Q96F10 170 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 VSIRQ9H7M9 311 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 PEMTQ9UBM1 199 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 FUT9Q9Y231 359 aa12.13□□□□□ -0.47
TRAFD1-203ENST00000547063 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 A0A1W2PS18 150 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 TEX46H3BTG2 121 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 CRYBB3P26998 211 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 SYNJ2BPP57105 145 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 RAB14P61106 215 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 IFITM2Q01629 132 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 GCSAMLQ5JQS6 135 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 FAM122CQ6P4D5 195 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 PATE2Q6UY27 113 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 LINC00305Q7Z4B0 112 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 RPP25LQ8N5L8 163 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 MARC2Q969Z3 335 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 GRAMD2BQ96HH9 432 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 ZNF414Q96IQ9 312 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 SLC25A39Q9BZJ4 359 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 TMEM231Q9H6L2 316 aa12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 TECRQ9NZ01 308 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-203ENST00000547063 ZNF705EA8MWA4 302 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 PF4P02776 101 aa12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 SLURP1P55000 103 aa12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 UNQ9165/PRO28630Q6UXU0 137 aa12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 STXBP6Q8NFX7 210 aa12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 SHANK2-AS3Q9BTD1 123 aa12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 SEPSECSQ9HD40 501 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
TRAFD1-203ENST00000547063 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 H3BRN7 92 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 M0QZ24 198 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 RGS13O14921 159 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 H2AFB1P0C5Y9 115 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 C8orf88P0DMB2 117 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 KHDC3LQ587J8 217 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 C1orf194Q5T5A4 169 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 HIST2H2BDQ6DRA6 164 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 GPR82Q96P67 336 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 UHRF2Q96PU4 802 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
TRAFD1-203ENST00000547063 IGHV7-4-1A0A0J9YVY3 117 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 ZNF98A6NK75 572 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 HBE1P02100 147 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 PQLC2Q6ZP29 291 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 OR9G4Q8NGQ1 327 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 MBD3L1Q8WWY6 194 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 DLX4Q92988 240 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 ELOVL1Q9BW60 279 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 U3KQE9 123 aa12.09□□□□□ -0.47
TRAFD1-203ENST00000547063 OVOL1O14753 267 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 CXorf1O96002 111 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 CD5P06127 495 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 FHITP49789 147 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 TM4SF20Q53R12 229 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 BPIFA4PQ86YQ2 179 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 SFT2D1Q8WV19 159 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 SMPXQ9UHP9 88 aa12.08□□□□□ -0.48
TRAFD1-203ENST00000547063 TRAV1-1A0A0B4J248 108 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 TMEM213A2RRL7 107 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 MAP1LC3B2A6NCE7 125 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 ZNF207O43670 478 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 BUB3O43684 328 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 STAG3L2P0CL84 134 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 STAG3L3P0CL85 134 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 OR8I2Q8N0Y5 310 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 SCRT1Q9BWW7 348 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms