RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 STPG3Q8N7X2 389 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 OVOL2Q9BRP0 275 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 MARVELD1Q9BSK0 173 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 GGACTQ9BVM4 153 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 C11orf1Q9H5F2 150 aa8.76□□□□□ -1.01
YBX3-217ENST00000546164 GPN1Q9HCN4 374 aaPredicted RBP8.76□□□□□ -1.01
YBX3-217ENST00000546164 RYR3Q15413 4870 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 C5orf51A6NDU8 294 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 K7EPK0 472 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 CCNKO75909 580 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 DEFA1P59665 94 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 DEFA3P59666 94 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 LYZP61626 148 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 OR2F1Q13607 317 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 GSG1LQ6UXU4 331 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 BPIFCQ8NFQ6 507 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 OR10P1Q8NGE3 313 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 NPVFQ9HCQ7 196 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 NRN1Q9NPD7 142 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 FBXL17Q9UF56 701 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 CSMD3Q7Z407 3707 aa8.75□□□□□ -1.01
YBX3-217ENST00000546164 INMT-MINDY4F8WBC2 141 aa8.74□□□□□ -1.01
YBX3-217ENST00000546164 L7N2F9 121 aa8.74□□□□□ -1.01
YBX3-217ENST00000546164 DEDDO75618 318 aa8.74□□□□□ -1.01
YBX3-217ENST00000546164 RPL35AP18077 110 aaKnown RBP8.74□□□□□ -1.01
YBX3-217ENST00000546164 VAMP2P63027 116 aa8.74□□□□□ -1.01
YBX3-217ENST00000546164 ARL16Q0P5N6 197 aa8.74□□□□□ -1.01
YBX3-217ENST00000546164 TMEM182Q6ZP80 229 aaPredicted RBP8.74□□□□□ -1.01
YBX3-217ENST00000546164 CSTL1Q9H114 145 aa8.74□□□□□ -1.01
YBX3-217ENST00000546164 MGAT4CQ9UBM8 478 aa8.74□□□□□ -1.01
YBX3-217ENST00000546164 PLECQ15149 4684 aaKnown RBP8.74□□□□□ -1.01
YBX3-217ENST00000546164 SMCO3A2RU48 225 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 SPRY2O43597 315 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 ZNF688P0C7X2 276 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 PVALBP20472 110 aaPredicted RBP8.73□□□□□ -1.01
YBX3-217ENST00000546164 GATA2P23769 480 aaPredicted RBP8.73□□□□□ -1.01
YBX3-217ENST00000546164 S100A7P31151 101 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 PLP1P60201 277 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 SELENOTP62341 195 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 CYP2G1PQ6ZSU1 146 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 RNF183Q96D59 192 aa8.73□□□□□ -1.01
YBX3-217ENST00000546164 LSM5Q9Y4Y9 91 aaKnown RBP8.73□□□□□ -1.01
YBX3-217ENST00000546164 LYL1P12980 280 aa8.72□□□□□ -1.01
YBX3-217ENST00000546164 RRAS2P62070 204 aaPredicted RBP8.72□□□□□ -1.01
YBX3-217ENST00000546164 SNRPD3P62318 126 aaKnown RBP8.72□□□□□ -1.01
YBX3-217ENST00000546164 RAB32Q13637 225 aa8.72□□□□□ -1.01
YBX3-217ENST00000546164 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
YBX3-217ENST00000546164 CASC10Q5T4H9 136 aa8.72□□□□□ -1.01
YBX3-217ENST00000546164 TEPPQ6URK8 271 aa8.72□□□□□ -1.01
YBX3-217ENST00000546164 TRPT1Q86TN4 253 aaKnown RBP8.72□□□□□ -1.01
YBX3-217ENST00000546164 PPP1R14BQ96C90 147 aa8.72□□□□□ -1.01
YBX3-217ENST00000546164 LYRM2Q9NU23 88 aaPredicted RBP8.72□□□□□ -1.01
YBX3-217ENST00000546164 ZNF98A6NK75 572 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 SOCS3O14543 225 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 ORM2P19652 201 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 CAV2P51636 162 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 S100A10P60903 97 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 PSMG4Q5JS54 123 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 SAMD13Q5VXD3 122 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 STHQ8IWL8 128 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 OR8I2Q8N0Y5 310 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 IL17DQ8TAD2 202 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 GATAD1Q8WUU5 269 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 GPR82Q96P67 336 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 TMEM147Q9BVK8 224 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 RYR2Q92736 4967 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 DNAH1Q9P2D7 4330 aa8.71□□□□□ -1.02
YBX3-217ENST00000546164 FAM24AA6NFZ4 105 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 H3BRN7 92 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 GOSR2O14653 212 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 LINC00869P0C866 280 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 MEOX2P50222 304 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 SULT1A1P50225 295 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 BCAP31P51572 246 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 SLC38A11Q08AI6 406 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 VWC2Q2TAL6 325 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 TMEM41BQ5BJD5 291 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 PXDC1Q5TGL8 231 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 MORN3Q6PF18 240 aaPredicted RBP8.7□□□□□ -1.02
YBX3-217ENST00000546164 ZNF546Q86UE3 836 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 TMEM252Q8N6L7 170 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 OR1B1Q8NGR6 318 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 SHANK2-AS3Q9BTD1 123 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 NMES1Q9C002 83 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 SLC25A32Q9H2D1 315 aa8.7□□□□□ -1.02
YBX3-217ENST00000546164 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 ISLRO14498 428 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 AGPAT2O15120 278 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 HYPMO75409 117 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 CST7O76096 145 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 CA1P00915 261 aaPredicted RBP8.69□□□□□ -1.02
YBX3-217ENST00000546164 SPP1P10451 314 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 ATF4P18848 351 aaPredicted RBP8.69□□□□□ -1.02
YBX3-217ENST00000546164 S100A11P31949 105 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 ID1P41134 155 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 GALR1P47211 349 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 PSMB3P49720 205 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 RAP2BP61225 183 aa8.69□□□□□ -1.02
YBX3-217ENST00000546164 CYCSP99999 105 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms