RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PSMB3P49720 205 aa15.23■□□□□ 0.03
SCARB1-210ENST00000545493 C1orf194Q5T5A4 169 aa15.23■□□□□ 0.03
SCARB1-210ENST00000545493 ACOT7LQ6ZUV0 252 aa15.23■□□□□ 0.03
SCARB1-210ENST00000545493 SDHCQ99643 169 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-210ENST00000545493 SAV1Q9H4B6 383 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-210ENST00000545493 PFDN2Q9UHV9 154 aa15.23■□□□□ 0.03
SCARB1-210ENST00000545493 FLVCR2Q9UPI3 526 aa15.23■□□□□ 0.03
SCARB1-210ENST00000545493 C9orf170A2RU37 121 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 SNRPGP15A8MWD9 76 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 BTCP35070 178 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 PRR20EP86478 221 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 PRR20CP86479 221 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 PRR20DP86480 221 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 PRR20BP86481 221 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 PRR20AP86496 221 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 TRIQKQ629K1 86 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 TMEM182Q6ZP80 229 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-210ENST00000545493 PPP1R14BQ96C90 147 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 C1QTNF4Q9BXJ3 329 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 APLNQ9ULZ1 77 aa15.22■□□□□ 0.03
SCARB1-210ENST00000545493 GATA2P23769 480 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-210ENST00000545493 NUTF2P61970 127 aaKnown RBP15.21■□□□□ 0.03
SCARB1-210ENST00000545493 RPP30P78346 268 aaKnown RBP15.21■□□□□ 0.03
SCARB1-210ENST00000545493 SPANXN5Q5MJ07 72 aa15.21■□□□□ 0.03
SCARB1-210ENST00000545493 FOXI2Q6ZQN5 318 aa15.21■□□□□ 0.03
SCARB1-210ENST00000545493 ZNF709Q8N972 641 aa15.21■□□□□ 0.03
SCARB1-210ENST00000545493 C17orf77Q96MU5 243 aa15.21■□□□□ 0.03
SCARB1-210ENST00000545493 LINC00052Q96N35 136 aa15.21■□□□□ 0.03
SCARB1-210ENST00000545493 SLC25A32Q9H2D1 315 aa15.21■□□□□ 0.03
SCARB1-210ENST00000545493 NAP1L6A6NFF2 107 aa15.2■□□□□ 0.02
SCARB1-210ENST00000545493 IGLL5B9A064 214 aa15.2■□□□□ 0.02
SCARB1-210ENST00000545493 IGKV3-20P01619 116 aa15.2■□□□□ 0.02
SCARB1-210ENST00000545493 TCTAP57738 103 aa15.2■□□□□ 0.02
SCARB1-210ENST00000545493 POLR2GP62487 172 aaKnown RBP eCLIP15.2■□□□□ 0.02
SCARB1-210ENST00000545493 ZNF705AQ6ZN79 300 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-210ENST00000545493 OR4D5Q8NGN0 318 aa15.2■□□□□ 0.02
SCARB1-210ENST00000545493 COQ8AQ8NI60 647 aa15.2■□□□□ 0.02
SCARB1-210ENST00000545493 TRAV10A0A0B4J240 114 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 ID1P41134 155 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 FXYD7P58549 80 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 ID3Q02535 119 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 AKR1C1Q04828 323 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 ZNF767PQ75MW2 155 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 OR8I2Q8N0Y5 310 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 C20orf173Q96LM9 149 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 SLC45A2Q9UMX9 530 aa15.19■□□□□ 0.02
SCARB1-210ENST00000545493 STRAPQ9Y3F4 350 aaKnown RBP15.19■□□□□ 0.02
SCARB1-210ENST00000545493 F6UB75 175 aa15.18■□□□□ 0.02
SCARB1-210ENST00000545493 ISLRO14498 428 aa15.18■□□□□ 0.02
SCARB1-210ENST00000545493 OR4E1P0C645 316 aa15.18■□□□□ 0.02
SCARB1-210ENST00000545493 ANXA7P20073 488 aaKnown RBP15.18■□□□□ 0.02
SCARB1-210ENST00000545493 INPP1P49441 399 aa15.18■□□□□ 0.02
SCARB1-210ENST00000545493 C12orf74Q32Q52 190 aa15.18■□□□□ 0.02
SCARB1-210ENST00000545493 SLC25A22Q9H936 323 aa15.18■□□□□ 0.02
SCARB1-210ENST00000545493 LINC00854A0A1B0GVQ3 168 aa15.17■□□□□ 0.02
SCARB1-210ENST00000545493 ZNF98A6NK75 572 aa15.17■□□□□ 0.02
SCARB1-210ENST00000545493 PMS2P5A8MQ11 134 aa15.17■□□□□ 0.02
SCARB1-210ENST00000545493 ZNF705FA8MVS1 300 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-210ENST00000545493 SSSCA1O60232 199 aa15.17■□□□□ 0.02
SCARB1-210ENST00000545493 CFDP00746 253 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-210ENST00000545493 ZNF705DP0CH99 300 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-210ENST00000545493 ZNF705BP0CI00 300 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-210ENST00000545493 PAX9P55771 341 aa15.17■□□□□ 0.02
SCARB1-210ENST00000545493 BPIFCQ8NFQ6 507 aa15.17■□□□□ 0.02
SCARB1-210ENST00000545493 SLC35B3Q9H1N7 401 aa15.17■□□□□ 0.02
SCARB1-210ENST00000545493 DYNC1H1Q14204 4646 aaKnown RBP15.17■□□□□ 0.02
SCARB1-210ENST00000545493 IGHV4-4A0A075B6R2 117 aa15.16■□□□□ 0.02
SCARB1-210ENST00000545493 CCNKO75909 580 aa15.16■□□□□ 0.02
SCARB1-210ENST00000545493 ORM2P19652 201 aa15.16■□□□□ 0.02
SCARB1-210ENST00000545493 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.16■□□□□ 0.02
SCARB1-210ENST00000545493 CLUHP3Q96NS8 147 aa15.16■□□□□ 0.02
SCARB1-210ENST00000545493 NEU1Q99519 415 aa15.16■□□□□ 0.02
SCARB1-210ENST00000545493 A0A0J9YX75 114 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 AMBPP02760 352 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 IL7P13232 177 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 GALR1P47211 349 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 MEOX2P50222 304 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 TMEM144Q7Z5S9 345 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 OR4B1Q8NGF8 309 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 OR1B1Q8NGR6 318 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 SCRT1Q9BWW7 348 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 PSENENQ9NZ42 101 aa15.15■□□□□ 0.02
SCARB1-210ENST00000545493 SMCO3A2RU48 225 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 H3BRN7 92 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 C4orf46Q504U0 113 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 FAM78BQ5VT40 261 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 SAMD13Q5VXD3 122 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 CYP2G1PQ6ZSU1 146 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 C16orf92Q96LL3 132 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 C7orf50Q9BRJ6 194 aaKnown RBP15.14■□□□□ 0.01
SCARB1-210ENST00000545493 TMEM147Q9BVK8 224 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 DOK5Q9P104 306 aa15.14■□□□□ 0.01
SCARB1-210ENST00000545493 DNAH11Q96DT5 4516 aa15.13■□□□□ 0.01
SCARB1-210ENST00000545493 A8MTW9 85 aa15.13■□□□□ 0.01
SCARB1-210ENST00000545493 SPATA31B1PQ5VZV4 182 aa15.13■□□□□ 0.01
SCARB1-210ENST00000545493 TMEM14EPQ6UXP3 125 aa15.13■□□□□ 0.01
SCARB1-210ENST00000545493 RSG1Q9BU20 258 aa15.13■□□□□ 0.01
SCARB1-210ENST00000545493 RNF126Q9BV68 326 aa15.13■□□□□ 0.01
SCARB1-210ENST00000545493 RCL1Q9Y2P8 373 aaKnown RBP15.13■□□□□ 0.01
SCARB1-210ENST00000545493 IGHV3OR16-12A0A075B7B8 117 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms