RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 P01737 135 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 ZNF705DP0CH99 300 aaPredicted RBP9.9□□□□□ -0.82
PAAF1-215ENST00000544909 ZNF705BP0CI00 300 aaPredicted RBP9.9□□□□□ -0.82
PAAF1-215ENST00000544909 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.82
PAAF1-215ENST00000544909 TCL1AP56279 114 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 PLGLAQ15195 96 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 Q6AWC8 147 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 UNQ6494/PRO21346Q6UXR6 183 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 CFHR4Q92496 578 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 LINC00479Q96M42 142 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 FBXL15Q9H469 300 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 NRN1Q9NPD7 142 aa9.9□□□□□ -0.82
PAAF1-215ENST00000544909 H3BRN7 92 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 K7EIM0 57 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 TIMM23O14925 209 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 SIAH2O43255 324 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 FAM87AP0C7U9 286 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 CNTFRP26992 372 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 SLAQ13239 276 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 PMCHL1Q16048 86 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 MINOS1Q5TGZ0 78 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 C11orf71Q6IPW1 123 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 C16orf54Q6UWD8 224 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 RBPMS2Q6ZRY4 209 aaKnown RBP9.89□□□□□ -0.83
PAAF1-215ENST00000544909 NHLRC2Q8NBF2 726 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 OR4F17Q8NGA8 305 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 WNT10AQ9GZT5 417 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 MINOS1-NBL1R4GNA1 71 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 PTPRQQ9UMZ3 2332 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 AKAP13Q12802 2813 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 C20orf202A1L168 122 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 PLAUP00749 431 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 FRMD6-AS1P0C7T7 363 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 EBI3Q14213 229 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 Q86TA4 180 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 DTX2Q86UW9 622 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 LINC01560Q8TB33 94 aa9.89□□□□□ -0.83
PAAF1-215ENST00000544909 DAZAP1Q96EP5 407 aaKnown RBP9.89□□□□□ -0.83
PAAF1-215ENST00000544909 TLN1Q9Y490 2541 aaKnown RBP9.88□□□□□ -0.83
PAAF1-215ENST00000544909 TRBV19A0A075B6N1 114 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 TRAV34A0A0B4J273 112 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 CCL21O00585 134 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 CNIH1O95406 144 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 COX7A1P24310 79 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 FCGR2BP31994 310 aaPredicted RBP9.88□□□□□ -0.83
PAAF1-215ENST00000544909 LYZP61626 148 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 ZNF562Q6V9R5 426 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 BLNKQ8WV28 456 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 FAM168AQ92567 244 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 ALKBH7Q9BT30 221 aaPredicted RBP9.88□□□□□ -0.83
PAAF1-215ENST00000544909 SSBP3Q9BWW4 388 aaPredicted RBP9.88□□□□□ -0.83
PAAF1-215ENST00000544909 THYN1Q9P016 225 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 ONECUT1Q9UBC0 465 aa9.88□□□□□ -0.83
PAAF1-215ENST00000544909 BSNQ9UPA5 3926 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 FAM90A27PA6NNH2 459 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 DIRC3C9JPN6 131 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 CA1P00915 261 aaPredicted RBP9.87□□□□□ -0.83
PAAF1-215ENST00000544909 IGHV3-48P01763 117 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 IGLC2P0DOY2 106 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 PMCHP20382 165 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 GNG5P63218 68 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 C5orf64Q2M2E5 130 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 KLHDC1Q8N7A1 406 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 GATD1Q8NB37 220 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 BORCS7Q96B45 105 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
PAAF1-215ENST00000544909 C1RLQ9NZP8 487 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 FBXL7Q9UJT9 491 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
PAAF1-215ENST00000544909 LOC105371242A0A075B767 164 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 WI2-2373I1.2A0A1W2PRP0 233 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 F2Z2F3 143 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 NUTF2P61970 127 aaKnown RBP9.86□□□□□ -0.83
PAAF1-215ENST00000544909 SLC35B1P78383 322 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 VN1R17PQ8TDU5 208 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 RNF125Q96EQ8 232 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 HAX1O00165 279 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 SPINK4O60575 86 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 HSBP1O75506 76 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 RUSC1-AS1Q66K80 236 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 PRR27Q6MZM9 219 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 COX8CQ7Z4L0 72 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 NIT1Q86X76 327 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 TTC9CQ8N5M4 171 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 ZNF491Q8N8L2 437 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 Q8N976 141 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 TXN2Q99757 166 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 NDFIP1Q9BT67 221 aa9.86□□□□□ -0.83
PAAF1-215ENST00000544909 IGLV11-55A0A075B6I3 123 aa9.85□□□□□ -0.83
PAAF1-215ENST00000544909 IGLV2-11P01706 119 aa9.85□□□□□ -0.83
PAAF1-215ENST00000544909 COL8A1P27658 744 aa9.85□□□□□ -0.83
PAAF1-215ENST00000544909 CDKN1AP38936 164 aa9.85□□□□□ -0.83
PAAF1-215ENST00000544909 CTRLP40313 264 aa9.85□□□□□ -0.83
PAAF1-215ENST00000544909 Q8N6K4 173 aa9.85□□□□□ -0.83
PAAF1-215ENST00000544909 SNHG12Q9BXW3 62 aa9.85□□□□□ -0.83
PAAF1-215ENST00000544909 PTPRZ1P23471 2315 aaPredicted RBP9.85□□□□□ -0.83
PAAF1-215ENST00000544909 A0A1B0GV90 55 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms