RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TBC1D24Q9ULP9 559 aa11.74□□□□□ -0.53
DDX55-212ENST00000544738 H3BMM0 161 aa11.73□□□□□ -0.53
DDX55-212ENST00000544738 HOXB5P09067 269 aa11.73□□□□□ -0.53
DDX55-212ENST00000544738 LYZP61626 148 aa11.73□□□□□ -0.53
DDX55-212ENST00000544738 GGNBP1Q5YKI7 109 aa11.73□□□□□ -0.53
DDX55-212ENST00000544738 CSNK1G2-AS1Q8NCQ2 148 aa11.73□□□□□ -0.53
DDX55-212ENST00000544738 X6R8D5 127 aa11.73□□□□□ -0.53
DDX55-212ENST00000544738 IGLL5B9A064 214 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 WRBO00258 174 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
DDX55-212ENST00000544738 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 HLA-DRB4P13762 266 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
DDX55-212ENST00000544738 THAP8Q8NA92 274 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 SRRQ9GZT4 340 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 MAGT1Q9H0U3 335 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 HLA-DRB4X5D2U9 266 aa11.72□□□□□ -0.53
DDX55-212ENST00000544738 S100A7P31151 101 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 PSMB3P49720 205 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 OR2F1Q13607 317 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 SAMD13Q5VXD3 122 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 TRIQKQ629K1 86 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.53
DDX55-212ENST00000544738 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
DDX55-212ENST00000544738 IGKV1OR2-108A0A075B7D4 117 aa11.7□□□□□ -0.54
DDX55-212ENST00000544738 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
DDX55-212ENST00000544738 NDUFB6O95139 128 aa11.7□□□□□ -0.54
DDX55-212ENST00000544738 SPANXN5Q5MJ07 72 aa11.7□□□□□ -0.54
DDX55-212ENST00000544738 SPATA31B1PQ5VZV4 182 aa11.7□□□□□ -0.54
DDX55-212ENST00000544738 COQ8AQ8NI60 647 aa11.7□□□□□ -0.54
DDX55-212ENST00000544738 XCL2Q9UBD3 114 aa11.7□□□□□ -0.54
DDX55-212ENST00000544738 CENPXA8MT69 81 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 PRSS46E5RG02 174 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 ISLRO14498 428 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 IFNA21P01568 189 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 HLA-DMBP28068 263 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 MEOX2P50222 304 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 ID3Q02535 119 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 FOXI2Q6ZQN5 318 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 BPIFCQ8NFQ6 507 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 LINC00052Q96N35 136 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
DDX55-212ENST00000544738 WDR12Q9GZL7 423 aaKnown RBP11.69□□□□□ -0.54
DDX55-212ENST00000544738 SAV1Q9H4B6 383 aaPredicted RBP11.69□□□□□ -0.54
DDX55-212ENST00000544738 ELOA3CA0A087WX78 387 aaPredicted RBP11.68□□□□□ -0.54
DDX55-212ENST00000544738 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
DDX55-212ENST00000544738 ADAP1O75689 374 aa11.68□□□□□ -0.54
DDX55-212ENST00000544738 GALR1P47211 349 aa11.68□□□□□ -0.54
DDX55-212ENST00000544738 AKR1C1Q04828 323 aa11.68□□□□□ -0.54
DDX55-212ENST00000544738 BAK1Q16611 211 aa11.68□□□□□ -0.54
DDX55-212ENST00000544738 SOCS3O14543 225 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 RTL8CO15255 209 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 OR4E1P0C645 316 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 ZNF575Q86XF7 245 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 GPR82Q96P67 336 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 NEU1Q99519 415 aa11.67□□□□□ -0.54
DDX55-212ENST00000544738 C7orf50Q9BRJ6 194 aaKnown RBP11.67□□□□□ -0.54
DDX55-212ENST00000544738 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 ZNF98A6NK75 572 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 H3BP45 60 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 M0R2N4 97 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 C4orf46Q504U0 113 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 GDF5OSQ5U4N7 250 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 ZNF705AQ6ZN79 300 aaPredicted RBP11.66□□□□□ -0.54
DDX55-212ENST00000544738 Q6ZTC4 211 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 ACOT7LQ6ZUV0 252 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 TMEM147Q9BVK8 224 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 RPRMQ9NS64 109 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 PSENENQ9NZ42 101 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 FLVCR2Q9UPI3 526 aa11.66□□□□□ -0.54
DDX55-212ENST00000544738 TMEM189A5PLL7 270 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 ORM2P19652 201 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 PAX9P55771 341 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 POLR2GP62487 172 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDX55-212ENST00000544738 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 OR1B1Q8NGR6 318 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 SMIM8Q96KF7 97 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 C16orf92Q96LL3 132 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 SLC25A22Q9H936 323 aa11.65□□□□□ -0.54
DDX55-212ENST00000544738 LINC00854A0A1B0GVQ3 168 aa11.64□□□□□ -0.55
DDX55-212ENST00000544738 ZNF705FA8MVS1 300 aaPredicted RBP11.64□□□□□ -0.55
DDX55-212ENST00000544738 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
DDX55-212ENST00000544738 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
DDX55-212ENST00000544738 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
DDX55-212ENST00000544738 SDHCQ99643 169 aaPredicted RBP11.64□□□□□ -0.55
DDX55-212ENST00000544738 RSG1Q9BU20 258 aa11.64□□□□□ -0.55
DDX55-212ENST00000544738 RNF126Q9BV68 326 aa11.64□□□□□ -0.55
DDX55-212ENST00000544738 SLC25A32Q9H2D1 315 aa11.64□□□□□ -0.55
DDX55-212ENST00000544738 A0A0J9YX75 114 aa11.63□□□□□ -0.55
DDX55-212ENST00000544738 SMCO3A2RU48 225 aa11.63□□□□□ -0.55
DDX55-212ENST00000544738 SSSCA1O60232 199 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms