RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 KIFC1Q9BW19 673 aa0.59□□□□□ -2.31
RAP1B-231ENST00000544639 TRGV10A0A0A0MS01 117 aa0.58□□□□□ -2.32
RAP1B-231ENST00000544639 ERVS71-1P61550 626 aa0.58□□□□□ -2.32
RAP1B-231ENST00000544639 SPA17Q15506 151 aa0.58□□□□□ -2.32
RAP1B-231ENST00000544639 BTF3L4Q96K17 158 aa0.58□□□□□ -2.32
RAP1B-231ENST00000544639 LINC00467Q9BRT7 94 aa0.58□□□□□ -2.32
RAP1B-231ENST00000544639 NMNAT1Q9HAN9 279 aaPredicted RBP0.58□□□□□ -2.32
RAP1B-231ENST00000544639 TMEM14CQ9P0S9 112 aa0.58□□□□□ -2.32
RAP1B-231ENST00000544639 KIF1BO60333 1816 aa0.58□□□□□ -2.32
RAP1B-231ENST00000544639 FMN1Q68DA7 1419 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 TRBV19A0A075B6N1 114 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 IGHV1-58A0A0C4DH39 117 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 NUPR1O60356 82 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 EFNA4P52798 201 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 C22orf39Q6P5X5 142 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 GKN2Q86XP6 184 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 YPEL2Q96QA6 119 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 TAS2R7Q9NYW3 318 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 ALPK3Q96L96 1907 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 ZNF462Q96JM2 2506 aa0.57□□□□□ -2.32
RAP1B-231ENST00000544639 PLXNA4Q9HCM2 1894 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 APCP25054 2843 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 A0A1W2PPM0 123 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 TLCD2A6NGC4 264 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 A8MWV9 139 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 NDUFB3O43676 98 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 KLF7O75840 302 aaPredicted RBP0.56□□□□□ -2.32
RAP1B-231ENST00000544639 ATP5G3P48201 142 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 ROMO1P60602 79 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 LIN52Q52LA3 116 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 LINC00052Q96N35 136 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 TP53RKQ96S44 253 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 ORMDL1Q9P0S3 153 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 FRAS1Q86XX4 4008 aa0.56□□□□□ -2.32
RAP1B-231ENST00000544639 TNS3Q68CZ2 1445 aa0.55□□□□□ -2.32
RAP1B-231ENST00000544639 FAM159BA6NKW6 160 aa0.55□□□□□ -2.32
RAP1B-231ENST00000544639 CTXN2P0C2S0 81 aa0.55□□□□□ -2.32
RAP1B-231ENST00000544639 C2orf82Q6UX34 121 aa0.55□□□□□ -2.32
RAP1B-231ENST00000544639 OR10K1Q8NGX5 313 aa0.55□□□□□ -2.32
RAP1B-231ENST00000544639 IMUPQ9GZP8 106 aa0.55□□□□□ -2.32
RAP1B-231ENST00000544639 TAX1BP3O14907 124 aa0.54□□□□□ -2.32
RAP1B-231ENST00000544639 CYBAP13498 195 aa0.54□□□□□ -2.32
RAP1B-231ENST00000544639 DSCR4P56555 118 aaPredicted RBP0.54□□□□□ -2.32
RAP1B-231ENST00000544639 AKIRIN2Q53H80 203 aa0.54□□□□□ -2.32
RAP1B-231ENST00000544639 ZNF833PQ6ZTB9 187 aa0.54□□□□□ -2.32
RAP1B-231ENST00000544639 SLC25A21Q9BQT8 299 aaPredicted RBP0.54□□□□□ -2.32
RAP1B-231ENST00000544639 LY96Q9Y6Y9 160 aa0.54□□□□□ -2.32
RAP1B-231ENST00000544639 ASH1LQ9NR48 2969 aaKnown RBP0.54□□□□□ -2.32
RAP1B-231ENST00000544639 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 TRAV10A0A0B4J240 114 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 B4DSR2 109 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 E7EUB6 86 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 CST2P09228 141 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 BCL2L15Q5TBC7 163 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 GOLT1AQ6ZVE7 132 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 GRINAQ7Z429 371 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 PLPP5Q8NEB5 264 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 MNS1Q8NEH6 495 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 OR10X1Q8NGY0 326 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 PCTPQ9UKL6 214 aa0.53□□□□□ -2.32
RAP1B-231ENST00000544639 FAM32AQ9Y421 112 aaKnown RBP0.53□□□□□ -2.32
RAP1B-231ENST00000544639 KDM6AO15550 1401 aaPredicted RBP0.53□□□□□ -2.32
RAP1B-231ENST00000544639 CITO14578 2027 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 FREM3P0C091 2139 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 M0R378 163 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 IFNA7P01567 189 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 CD2P06729 351 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 HOXA6P31267 233 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 KRTAP26-1Q6PEX3 210 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 C4orf22Q6V702 233 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 ENY2Q9NPA8 101 aa0.52□□□□□ -2.33
RAP1B-231ENST00000544639 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
RAP1B-231ENST00000544639 OR2T8A6NH00 312 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 ARHGEF11O15085 1522 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 UBE2BP63146 152 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 FADDQ13158 208 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 DOCK4Q8N1I0 1966 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 OR5D14Q8NGL3 314 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 CANT1Q8WVQ1 401 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 PSTPIP2Q9H939 334 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 OPTCQ9UBM4 332 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 TNFSF18Q9UNG2 199 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 ARL2BPQ9Y2Y0 163 aa0.51□□□□□ -2.33
RAP1B-231ENST00000544639 TET1Q8NFU7 2136 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 IGLV3-32A0A0A0MS00 114 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 HMGB3O15347 200 aaKnown RBP0.5□□□□□ -2.33
RAP1B-231ENST00000544639 CST8O60676 142 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 IFNA6P05013 189 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 HSPE1P61604 102 aaKnown RBP0.5□□□□□ -2.33
RAP1B-231ENST00000544639 MYL5Q02045 173 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 HAGHLQ6PII5 290 aaPredicted RBP0.5□□□□□ -2.33
RAP1B-231ENST00000544639 SPATA8Q6RVD6 105 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 TEX37Q96LM6 180 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 C9orf16Q9BUW7 83 aa0.5□□□□□ -2.33
RAP1B-231ENST00000544639 PCF11O94913 1555 aaKnown RBP0.49□□□□□ -2.33
RAP1B-231ENST00000544639 A0A087WSZ3 146 aa0.49□□□□□ -2.33
RAP1B-231ENST00000544639 F8W1H4 67 aa0.49□□□□□ -2.33
RAP1B-231ENST00000544639 TMEM256-PLSCR3K7ERE1 68 aa0.49□□□□□ -2.33
RAP1B-231ENST00000544639 GGCTO75223 188 aaKnown RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms