RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 KLRD1Q13241 179 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 C1orf194Q5T5A4 169 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 CCDC144NLQ6NUI1 221 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 LHFPL4Q7Z7J7 247 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 KIR2DL5AQ8N109 375 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 ZNF586Q9NXT0 402 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 RNF24Q9Y225 148 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 POLR3KQ9Y2Y1 108 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-208ENST00000544327 C19orf71A6NCJ1 209 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 NPIPB5A8MRT5 1133 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 H3BRN7 92 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 SNRPCP09234 159 aaKnown RBP14.01□□□□□ -0.17
SCARB1-208ENST00000544327 MINOS1Q5TGZ0 78 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 LEMD1Q68G75 181 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 Q8N6K4 173 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 KCNS1Q96KK3 526 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 HSPB9Q9BQS6 159 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 MINOS1-NBL1R4GNA1 71 aa14.01□□□□□ -0.17
SCARB1-208ENST00000544327 SPTBN2O15020 2390 aa14□□□□□ -0.17
SCARB1-208ENST00000544327 A0A1B0GXF2 115 aa14□□□□□ -0.17
SCARB1-208ENST00000544327 GPX1P07203 203 aa14□□□□□ -0.17
SCARB1-208ENST00000544327 EBI3Q14213 229 aa14□□□□□ -0.17
SCARB1-208ENST00000544327 KIAA1644Q3SXP7 199 aa14□□□□□ -0.17
SCARB1-208ENST00000544327 NEU1Q99519 415 aa14□□□□□ -0.17
SCARB1-208ENST00000544327 RPP21Q9H633 154 aaKnown RBP14□□□□□ -0.17
SCARB1-208ENST00000544327 TRAV30A0A087WSZ9 112 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 OR2J3O76001 311 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 SRIP30626 198 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 LBHQ53QV2 105 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-208ENST00000544327 PRR27Q6MZM9 219 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 ZNF562Q6V9R5 426 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 TEX43Q6ZNM6 134 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 SAMD10Q9BYL1 202 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 ANKHD1Q8IWZ3 2542 aaKnown RBP13.99□□□□□ -0.17
SCARB1-208ENST00000544327 WI2-2373I1.2A0A1W2PRP0 233 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 GDF5OSQ5U4N7 250 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 Q86TA4 180 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 LYPD1Q8N2G4 141 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 GFRA4Q9GZZ7 299 aa13.99□□□□□ -0.17
SCARB1-208ENST00000544327 SOX21Q9Y651 276 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-208ENST00000544327 DCHS1Q96JQ0 3298 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 IGLV11-55A0A075B6I3 123 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 HIGD1CA8MV81 97 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 ZNF253O75346 499 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 IGLC2P0DOY2 106 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 SLAQ13239 276 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 KLF5Q13887 457 aaPredicted RBP13.98□□□□□ -0.17
SCARB1-208ENST00000544327 VMO1Q7Z5L0 202 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 TTC9CQ8N5M4 171 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 SIGLECL1Q8N7X8 197 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 TBX15Q96SF7 602 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 RPH3ALQ9UNE2 315 aa13.98□□□□□ -0.17
SCARB1-208ENST00000544327 KALRNO60229 2985 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 TRBV19A0A075B6N1 114 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 A0A1W2PS18 150 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 A8MWL6 223 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 NPIPB6E9PJ23 425 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 FBLN7Q53RD9 439 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 ASPHD1Q5U4P2 390 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 LINC00322Q6ZN03 302 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-208ENST00000544327 BPIFA4PQ86YQ2 179 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 LINC00469Q8N7U9 141 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 FANCD2OSQ96PS1 177 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 FAM231BA6NCW3 169 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 A6NNC1 897 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 ZNF705FA8MVS1 300 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-208ENST00000544327 H3BTX0 84 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 MRPS12O15235 138 aaKnown RBP13.97□□□□□ -0.17
SCARB1-208ENST00000544327 IGLV2-11P01706 119 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 ZNF705DP0CH99 300 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-208ENST00000544327 ZNF705BP0CI00 300 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-208ENST00000544327 S100A7AQ86SG5 101 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 ARPC1AQ92747 370 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 RNF125Q96EQ8 232 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 SGK494Q96LW2 274 aa13.97□□□□□ -0.17
SCARB1-208ENST00000544327 VWC2LB2RUY7 222 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 P01737 135 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 HES1Q14469 280 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 C16orf54Q6UWD8 224 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 OR4F17Q8NGA8 305 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 OR4B1Q8NGF8 309 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 C18orf32Q8TCD1 76 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 IGFBPL1Q8WX77 278 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 RCHY1Q96PM5 261 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 C2orf88Q9BSF0 95 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 FAM103A1Q9BTL3 118 aaKnown RBP13.96□□□□□ -0.17
SCARB1-208ENST00000544327 SIRPDQ9H106 197 aa13.96□□□□□ -0.17
SCARB1-208ENST00000544327 A0A1W2PPR1 153 aa13.95□□□□□ -0.18
SCARB1-208ENST00000544327 ZNF324O75467 553 aaPredicted RBP13.95□□□□□ -0.18
SCARB1-208ENST00000544327 MFAP4P55083 255 aa13.95□□□□□ -0.18
SCARB1-208ENST00000544327 TOMM20LQ6UXN7 152 aa13.95□□□□□ -0.18
SCARB1-208ENST00000544327 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
SCARB1-208ENST00000544327 TMEM75Q8N9X5 138 aa13.95□□□□□ -0.18
SCARB1-208ENST00000544327 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
SCARB1-208ENST00000544327 CEP295Q9C0D2 2601 aa13.95□□□□□ -0.18
SCARB1-208ENST00000544327 HLA-DRB1P01911 266 aa13.94□□□□□ -0.18
SCARB1-208ENST00000544327 SFTPCP11686 197 aa13.94□□□□□ -0.18
SCARB1-208ENST00000544327 CD24P25063 80 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms