RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PLXNA4Q9HCM2 1894 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 KIAA1671Q9BY89 1806 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 IGKV1-27A0A075B6S5 117 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 PAX1P15863 534 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 OTX1P32242 354 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 C5orf64Q2M2E5 130 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF324BQ6AW86 544 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 LYPD2Q6UXB3 125 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 CBLN2Q8IUK8 224 aa5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF256Q9Y2P7 627 aaPredicted RBP5.67□□□□□ -1.5
SRGAP1-206ENST00000543397 CGAP01215 116 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 CENPWQ5EE01 88 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF329Q86UD4 541 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 SDF2L1Q9HCN8 221 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 FAM215AQ9Y5M1 114 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 FANCMQ8IYD8 2048 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 IGKV1D-17A0A075B6S4 117 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 BUB1B-PAK6H3BSN5 160 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 J3QRE1 110 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 DANCRP0C864 163 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 C6orf226Q5I0X4 101 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 C10orf55Q5SWW7 151 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 SLC25A48Q6ZT89 311 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 CFHR4Q92496 578 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 TRBV20OR9-2A0A075B6H5 130 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 F8VVB4 439 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 F8VWA3 439 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 PRB1P04280 392 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 RNASE4P34096 147 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM42Q69YG0 159 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 ATP5L2Q7Z4Y8 100 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 LRRC75A-AS1Q8N1F1 130 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 OR4D5Q8NGN0 318 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 OR1P1Q8NH06 330 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 PARLQ9H300 379 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 DKK4Q9UBT3 224 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 MALRD1Q5VYJ5 2156 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 CD8AP01732 235 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 FABP2P12104 132 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 WT1P19544 449 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 FOXL2NBQ6ZUU3 175 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 THAP8Q8NA92 274 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 WIPF2Q8TF74 440 aaPredicted RBP5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM101Q96IK0 257 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 ZFAND3Q9H8U3 227 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 ANKHD1Q8IWZ3 2542 aaKnown RBP5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 HIVEP2P31629 2446 aa5.66□□□□□ -1.5
SRGAP1-206ENST00000543397 FAM90A9PA6NNJ1 464 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM250H0YL14 139 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 PEX7O00628 323 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 ARTNQ5T4W7 220 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 LCNL1Q6ZST4 164 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 PIP4P2Q8N4L2 257 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 KLK15Q9H2R5 256 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 PROK2Q9HC23 129 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 J3KT08 172 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 ETV2O00321 342 aaPredicted RBP5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 SPSB3Q6PJ21 355 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 CIARTQ8N365 385 aaPredicted RBP5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 FRMPD3Q5JV73 1810 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 SCN8AQ9UQD0 1980 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 A0A087X0K7 114 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 C5orf63A6NC05 138 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 NMBP08949 121 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 LEPP41159 167 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 SRSF7Q16629 238 aaKnown RBP eCLIP5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 NR2C2APQ86WQ0 139 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 Q9H3A6 140 aa5.65□□□□□ -1.5
SRGAP1-206ENST00000543397 WDR81Q562E7 1941 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 A0A0A6YYD4 124 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 WISP1O95388 367 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 PPP1R17O96001 155 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 PSMG4Q5JS54 123 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 NRGNQ92686 78 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 MRPL53Q96EL3 112 aaKnown RBP5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 CD7P09564 240 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 MPZP25189 248 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 PLA2G5P39877 138 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 UBE2E1P51965 193 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 SRSF4Q08170 494 aaKnown RBP5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 MIR17HGQ75NE6 70 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 ZNF114Q8NC26 417 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 OR11H4Q8NGC9 324 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 ZFP30Q9Y2G7 519 aa5.65□□□□□ -1.51
SRGAP1-206ENST00000543397 IGKV1D-8A0A087WSZ0 117 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 TRIAP1O43715 76 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 TDGF1P13385 188 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 MUC21Q5SSG8 566 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 RNF166Q96A37 237 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 RNF183Q96D59 192 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 USMG5Q96IX5 58 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 SPANXCQ9NY87 97 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 NAPSAO96009 420 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 SSBP2P81877 361 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 COQ2Q96H96 371 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 EFNB3Q15768 340 aa5.64□□□□□ -1.51
SRGAP1-206ENST00000543397 DNLZQ5SXM8 178 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms