RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	MC5R	P33032	325 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	RPL27A	P46776	148 aa	Known RBP	10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	ZNF138	P52744	262 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	RBX1	P62877	108 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	LRRC10	Q5BKY1	277 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	SLC25A34	Q6PIV7	304 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	CIART	Q8N365	385 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	DEFB123	Q8N688	67 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	NUP37	Q8NFH4	326 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	C8orf46	Q8TAG6	207 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	NDFIP1	Q9BT67	221 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	ASPM	Q8IZT6	3477 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	TOX4	O94842	621 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	NUDT3	O95989	172 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	TMEM116	Q8NCL8	245 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	CCL17	Q92583	94 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	MCRIP2	Q9BUT9	160 aa	Known RBP	10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	MAP1LC3C	Q9BXW4	147 aa		10.33	□□□□□ -0.76
DDX11-223	ENST00000542838	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.33	□□□□□ -0.76
DDX11-223	ENST00000542838		K7EP13	123 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	LIPF	P07098	398 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	LGALS7	P47929	136 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	PRNT	Q86SH4	94 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838		Q86TA4	180 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	TMEM178B	H3BS89	294 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	CSN3	P07498	182 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	OR5AL1	P0C617	328 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	LYZ	P61626	148 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	TMEM108	Q6UXF1	575 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	HIGD1A	Q9Y241	93 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	FAM231B	A6NCW3	169 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	CNTFR	P26992	372 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	ADIPOQ	Q15848	244 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	WFDC8	Q8IUA0	241 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	C8orf31	Q8N9H6	132 aa		10.32	□□□□□ -0.76
DDX11-223	ENST00000542838	SPAAR	A0A1B0GVQ0	90 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	NPIPB6	E9PJ23	425 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	PVRIG	Q6DKI7	326 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	PET117	Q6UWS5	81 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	GOLT1A	Q6ZVE7	132 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	DEFB124	Q8NES8	71 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	TMUB1	Q9BVT8	246 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	OTOR	Q9NRC9	128 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	TRAV30	A0A087WSZ9	112 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	HAX1	O00165	279 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	FTH1P19	P0C7X4	201 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	HTR1D	P28221	377 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	PLP1	P60201	277 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	BVES-AS1	Q5T3Y7	98 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838		Q71RC1	249 aa	Predicted RBP	10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	EXOC3-AS1	Q8N2X6	119 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	TEX45	Q8NA69	505 aa		10.31	□□□□□ -0.76
DDX11-223	ENST00000542838	ROS1	P08922	2347 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	TAX1BP3	O14907	124 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	CEACAM4	O75871	244 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	SCRT2	Q9NQ03	307 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	CTSZ	Q9UBR2	303 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	LOX	P28300	417 aa	Predicted RBP	10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	CEACAM8	P31997	349 aa	Predicted RBP	10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	HSPB8	Q9UJY1	196 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	MUC21	A0A0G2JKD1	596 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	MUC21	A0A140T8X8	626 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	APOH	P02749	345 aa	Predicted RBP	10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	PSG1	P11464	419 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	DLX6	P56179	175 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	MUC21	Q5SSG8	566 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	PMCHL2	Q9BQD1	86 aa		10.3	□□□□□ -0.76
DDX11-223	ENST00000542838	IGHV1-8	P0DP01	117 aa		10.29	□□□□□ -0.76
DDX11-223	ENST00000542838	C12orf54	Q6X4T0	127 aa		10.29	□□□□□ -0.76
DDX11-223	ENST00000542838	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.29	□□□□□ -0.76
DDX11-223	ENST00000542838	CBY3	A6NI87	242 aa		10.29	□□□□□ -0.76
DDX11-223	ENST00000542838	IGLV2-11	P01706	119 aa		10.29	□□□□□ -0.76
DDX11-223	ENST00000542838	SRSF12	Q8WXF0	261 aa	Known RBP	10.29	□□□□□ -0.76
DDX11-223	ENST00000542838	ABCA1	O95477	2261 aa		10.29	□□□□□ -0.76
DDX11-223	ENST00000542838		A0A1B0GUT8	65 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	HLA-DRB1	P01911	266 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	TMEM155	Q4W5P6	130 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	MS4A6A	Q9H2W1	248 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	SIGLEC9	Q9Y336	463 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	F11R	Q9Y624	299 aa	Known RBP	10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	OR2T8	A6NH00	312 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	TNFRSF13B	O14836	293 aa	Predicted RBP	10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	ARMS2	P0C7Q2	107 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	CDKN1B	P46527	198 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	BSPH1	Q075Z2	132 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	ASCL5	Q7RTU5	278 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	DEFB125	Q8N687	156 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	ASCL2	Q99929	193 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	TMEM133	Q9H2Q1	129 aa		10.28	□□□□□ -0.76
DDX11-223	ENST00000542838	RBP4	P02753	201 aa		10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	CRYGB	P07316	175 aa		10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	IGLC1	P0CG04	106 aa		10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	PRB4	P10163	310 aa	Predicted RBP	10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	DLX1	P56177	255 aa		10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	PRB3	Q04118	309 aa	Predicted RBP	10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	RNF151	Q2KHN1	245 aa		10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	PIP4P1	Q86T03	277 aa		10.27	□□□□□ -0.76
DDX11-223	ENST00000542838	NEU4	Q8WWR8	484 aa	Predicted RBP	10.27	□□□□□ -0.76

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