RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SEC14L6B5MCN3 397 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 LINC01619G3V211 115 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 HMGB3O15347 200 aaKnown RBP4.11□□□□□ -1.75
CPSF7-220ENST00000541963 NUPL2O15504 423 aaKnown RBP4.11□□□□□ -1.75
CPSF7-220ENST00000541963 RBFOX2O43251 390 aaKnown RBP eCLIP4.11□□□□□ -1.754e-7■□□□□ 10.3
CPSF7-220ENST00000541963 HPRT1P00492 218 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 LGALS1P09382 135 aaKnown RBP4.11□□□□□ -1.75
CPSF7-220ENST00000541963 AKAIN1P0CW23 69 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 IGKV1-13P0DP09 117 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 PTHLHP12272 177 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 NQO2P16083 231 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 HIST1H1BP16401 226 aaKnown RBP4.11□□□□□ -1.75
CPSF7-220ENST00000541963 INSL3P51460 131 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 CAV2P51636 162 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 TAS2R31P59538 309 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 ERVK-16P61578 105 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 RPL30P62888 115 aaKnown RBP4.11□□□□□ -1.75
CPSF7-220ENST00000541963 KIAA0141Q14154 515 aaPredicted RBP4.11□□□□□ -1.75
CPSF7-220ENST00000541963 MEF2DQ14814 521 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 DEFB121Q5J5C9 76 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 OR2B11Q5JQS5 317 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 AADACL3Q5VUY0 350 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 TERB2Q8NHR7 220 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 MRAPQ8TCY5 172 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 MYOZ3Q8TDC0 251 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 RXFP4Q8TDU9 374 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 GPX8Q8TED1 209 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 C5orf30Q96GV9 206 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 USMG5Q96IX5 58 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 OR5B12Q96R08 314 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF471Q9BX82 626 aaPredicted RBP4.11□□□□□ -1.75
CPSF7-220ENST00000541963 UQCC1Q9NVA1 299 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 ANAPC10Q9UM13 185 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 TNFSF18Q9UNG2 199 aa4.11□□□□□ -1.75
CPSF7-220ENST00000541963 A0A087X0K7 114 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 A0A0B4J2A0 478 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 GPR31O00270 319 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 OVOL1O14753 267 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 CYB5BO43169 146 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 TNFSF12O43508 249 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 PGLYRP1O75594 196 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-220ENST00000541963 KBTBD11O94819 623 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 AMBPP02760 352 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 OR9G9P0C7N8 305 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 LINC00614P0C842 121 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 SAA1P0DJI8 122 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-220ENST00000541963 GNRHRP30968 328 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 HRH1P35367 487 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 RPL27AP46776 148 aaKnown RBP4.1□□□□□ -1.75
CPSF7-220ENST00000541963 CCR6P51684 374 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 RPL8P62917 257 aaKnown RBP4.1□□□□□ -1.75
CPSF7-220ENST00000541963 NDPQ00604 133 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 ATP5G2Q06055 141 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 FABP9Q0Z7S8 132 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 EIF4EBP1Q13541 118 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-220ENST00000541963 DEFB136Q30KP8 78 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 AARDQ4LEZ3 155 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF818PQ6ZRF7 136 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF429Q86V71 674 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 BAP18Q8IXM2 172 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 TTC9CQ8N5M4 171 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 TMEM167AQ8TBQ9 72 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 GATAD1Q8WUU5 269 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 SRSF12Q8WXF0 261 aaKnown RBP4.1□□□□□ -1.75
CPSF7-220ENST00000541963 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 SCGB3A2Q96PL1 93 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 PRRT1Q99946 306 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 PBDC1Q9BVG4 233 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 COMMD5Q9GZQ3 224 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 C5orf66Q9H5L9 145 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF430Q9H8G1 570 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-220ENST00000541963 GNB4Q9HAV0 340 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 SLC2A8Q9NY64 477 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 BET1LQ9NYM9 111 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 MTFP1Q9UDX5 166 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 SHPKQ9UHJ6 478 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 FBXO7Q9Y3I1 522 aa4.1□□□□□ -1.75
CPSF7-220ENST00000541963 A0A087WWC5 75 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 A0A1B0GW64 132 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 FAM223BA6NKX1 122 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 COLCA2A8K830 154 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 UPK2O00526 184 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 GOSR2O14653 212 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 SOX15O60248 233 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 IGHV3-11P01762 117 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 DEFA4P12838 97 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 RAB5AP20339 215 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 FGF7P21781 194 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 F2RP25116 425 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 XGP55808 180 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 EGFEM1PQ0D2K5 195 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 COTL1Q14019 142 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 VAX1Q5SQQ9 334 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 ETFRF1Q6IPR1 90 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 ATRAIDQ6UW56 229 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 FAM223AQ8IWN6 122 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 VKORC1L1Q8N0U8 176 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 ARRDC1Q8N5I2 433 aa4.09□□□□□ -1.75
CPSF7-220ENST00000541963 TMEM229BQ8NBD8 167 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms