RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 S100A7P31151 101 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 OPRK1P41145 380 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 AP2S1P53680 142 aaPredicted RBP4.25□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM187Q14656 261 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 SMCO1Q147U7 214 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 HAGHQ16775 308 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 BSXQ3C1V8 233 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 NMSQ5H8A3 153 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 BTNL8Q6UX41 500 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 UNQ9165/PRO28630Q6UXU0 137 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 C19orf35Q6ZS72 473 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 LINC00299Q6ZSB3 139 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 HAPLN4Q86UW8 402 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM61Q8N0U2 210 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 KIR2DL5AQ8N109 375 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 LRTM2Q8N967 370 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 OR1S2Q8NGQ3 325 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 KIR2DL5BQ8NHK3 375 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 Q8WTZ3 238 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 CACNG8Q8WXS5 425 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 PINX1Q96BK5 328 aaKnown RBP4.25□□□□□ -1.73
SUDS3-202ENST00000541280 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 CIB3Q96Q77 187 aaPredicted RBP4.25□□□□□ -1.73
SUDS3-202ENST00000541280 C7orf50Q9BRJ6 194 aaKnown RBP4.25□□□□□ -1.73
SUDS3-202ENST00000541280 CHRDL1Q9BU40 450 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 C20orf24Q9BUV8 137 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 MLXQ9UH92 298 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 TMED3Q9Y3Q3 217 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 S4R3C0 116 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 PLXNB1O43157 2135 aa4.25□□□□□ -1.73
SUDS3-202ENST00000541280 IGHV3-35A0A0C4DH35 117 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 CHEK1O14757 476 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 CFDP00746 253 aaPredicted RBP4.24□□□□□ -1.73
SUDS3-202ENST00000541280 IFNA10P01566 189 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 CD7P09564 240 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 GPX4P36969 197 aaPredicted RBP4.24□□□□□ -1.73
SUDS3-202ENST00000541280 NUP62P37198 522 aaPredicted RBP4.24□□□□□ -1.73
SUDS3-202ENST00000541280 APOC4P55056 127 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 YPEL3P61236 119 aaPredicted RBP4.24□□□□□ -1.73
SUDS3-202ENST00000541280 RAB11AP62491 216 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 TNFRSF9Q07011 255 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 TRIQKQ629K1 86 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 FAAP20Q6NZ36 180 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 WDR73Q6P4I2 378 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 DEFB125Q8N687 156 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 SLC24A4Q8NFF2 622 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 MUC7Q8TAX7 377 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 TRIM63Q969Q1 353 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM230Q96A57 120 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 METTL26Q96S19 204 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 RHPN1-AS1Q9BWJ2 59 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 GGTLC1Q9BX51 225 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 SRD5A3Q9H8P0 318 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 HSPB7Q9UBY9 170 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 CACNG5Q9UF02 275 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 TP53TG1Q9Y2A0 90 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 V9GYH0 126 aa4.24□□□□□ -1.73
SUDS3-202ENST00000541280 IGHV3-21A0A0B4J1V1 117 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 A0A0G2JRQ6 117 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 RBMY1BA6NDE4 496 aaKnown RBP4.23□□□□□ -1.73
SUDS3-202ENST00000541280 RBMY1EA6NEQ0 496 aaKnown RBP4.23□□□□□ -1.73
SUDS3-202ENST00000541280 HELTA6NFD8 242 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 DNASE2O00115 360 aaPredicted RBP4.23□□□□□ -1.73
SUDS3-202ENST00000541280 SFT2D2O95562 160 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 IFNA21P01568 189 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 RBMY1DP0C7P1 496 aaKnown RBP4.23□□□□□ -1.73
SUDS3-202ENST00000541280 NPY1RP25929 384 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 CRYBB3P26998 211 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 FCN2Q15485 313 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 ZNF79Q15937 498 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 TOMM20LQ6UXN7 152 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 LYZL2Q7Z4W2 148 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 TMED4Q7Z7H5 227 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 CENPSQ8N2Z9 138 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 OR1S1Q8NH92 325 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 COQ8AQ8NI60 647 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 LHFPL5Q8TAF8 219 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 DTD1Q8TEA8 209 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 SRRQ9GZT4 340 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 VSIRQ9H7M9 311 aa4.23□□□□□ -1.73
SUDS3-202ENST00000541280 PUS1Q9Y606 427 aaKnown RBP eCLIP4.23□□□□□ -1.73
SUDS3-202ENST00000541280 VWFP04275 2813 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 SNRPGP15A8MWD9 76 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 PITX3O75364 302 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 NDUFB6O95139 128 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 IFNA4P05014 189 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 IGLC1P0CG04 106 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 RD3LP0DJH9 198 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 OR10J1P30954 320 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 SUPT4H1P63272 117 aaKnown RBP4.22□□□□□ -1.73
SUDS3-202ENST00000541280 TMEM41BQ5BJD5 291 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 SPINK9Q5DT21 86 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 SAMD13Q5VXD3 122 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 PRSS54Q6PEW0 395 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 TCF24Q7RTU0 167 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 S100A7AQ86SG5 101 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 RNF2Q99496 336 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 CSTL1Q9H114 145 aa4.22□□□□□ -1.73
SUDS3-202ENST00000541280 EDA2RQ9HAV5 297 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms