RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FGF1P05230 155 aa3□□□□□ -1.93
YBX3-210ENST00000540975 EIF4EP06730 217 aaKnown RBP3□□□□□ -1.93
YBX3-210ENST00000540975 SPINK8P0C7L1 97 aa3□□□□□ -1.93
YBX3-210ENST00000540975 SFTA3P0C7M3 94 aa3□□□□□ -1.93
YBX3-210ENST00000540975 SLC25A4P12235 298 aa3□□□□□ -1.93
YBX3-210ENST00000540975 INPP1P49441 399 aa3□□□□□ -1.93
YBX3-210ENST00000540975 POLR2JP52435 117 aaKnown RBP3□□□□□ -1.93
YBX3-210ENST00000540975 RBM11P57052 281 aaKnown RBP3□□□□□ -1.93
YBX3-210ENST00000540975 TPPP2P59282 170 aa3□□□□□ -1.93
YBX3-210ENST00000540975 CRADDP78560 199 aa3□□□□□ -1.93
YBX3-210ENST00000540975 ZNF92Q03936 586 aa3□□□□□ -1.93
YBX3-210ENST00000540975 AKR1C1Q04828 323 aa3□□□□□ -1.93
YBX3-210ENST00000540975 SYCNQ0VAF6 134 aa3□□□□□ -1.93
YBX3-210ENST00000540975 PRDX4Q13162 271 aa3□□□□□ -1.93
YBX3-210ENST00000540975 CATR1Q13166 79 aa3□□□□□ -1.93
YBX3-210ENST00000540975 HMGN3Q15651 99 aa3□□□□□ -1.93
YBX3-210ENST00000540975 TDRG1Q3Y452 100 aa3□□□□□ -1.93
YBX3-210ENST00000540975 MEIG1Q5JSS6 88 aa3□□□□□ -1.93
YBX3-210ENST00000540975 FAM201AQ5SY85 155 aa3□□□□□ -1.93
YBX3-210ENST00000540975 IBA57Q5T440 356 aaKnown RBP3□□□□□ -1.93
YBX3-210ENST00000540975 Q5XG85 94 aa3□□□□□ -1.93
YBX3-210ENST00000540975 ZNF493Q6ZR52 646 aa3□□□□□ -1.93
YBX3-210ENST00000540975 ZNF550Q7Z398 422 aa3□□□□□ -1.93
YBX3-210ENST00000540975 ZCCHC24Q8N2G6 241 aaKnown RBP3□□□□□ -1.93
YBX3-210ENST00000540975 OR2M3Q8NG83 312 aa3□□□□□ -1.93
YBX3-210ENST00000540975 OR52R1Q8NGF1 315 aa3□□□□□ -1.93
YBX3-210ENST00000540975 OR1J4Q8NGS1 313 aa3□□□□□ -1.93
YBX3-210ENST00000540975 OR10D3Q8NH80 312 aa3□□□□□ -1.93
YBX3-210ENST00000540975 PPTC7Q8NI37 304 aa3□□□□□ -1.93
YBX3-210ENST00000540975 TWIST2Q8WVJ9 160 aa3□□□□□ -1.93
YBX3-210ENST00000540975 PSMF1Q92530 271 aa3□□□□□ -1.93
YBX3-210ENST00000540975 TSLPQ969D9 159 aa3□□□□□ -1.93
YBX3-210ENST00000540975 MUCL1Q96DR8 90 aa3□□□□□ -1.93
YBX3-210ENST00000540975 ADAT3Q96EY9 351 aaPredicted RBP3□□□□□ -1.93
YBX3-210ENST00000540975 LINC01587Q99440 93 aa3□□□□□ -1.93
YBX3-210ENST00000540975 TMEM70Q9BUB7 260 aa3□□□□□ -1.93
YBX3-210ENST00000540975 GGTLC1Q9BX51 225 aa3□□□□□ -1.93
YBX3-210ENST00000540975 WDR61Q9GZS3 305 aaKnown RBP3□□□□□ -1.93
YBX3-210ENST00000540975 SHPKQ9UHJ6 478 aa3□□□□□ -1.93
YBX3-210ENST00000540975 DNAJC15Q9Y5T4 150 aa3□□□□□ -1.93
YBX3-210ENST00000540975 IER3IP1Q9Y5U9 82 aa3□□□□□ -1.93
YBX3-210ENST00000540975 COL4A1P02462 1669 aa3□□□□□ -1.93
YBX3-210ENST00000540975 BAZ2BQ9UIF8 2168 aaKnown RBP3□□□□□ -1.93
YBX3-210ENST00000540975 DSPPQ9NZW4 1301 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 SIP14410 1827 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 FXYD6-FXYD2A0A087WZ82 144 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 TRAV5A0A0B4J249 113 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 MYBPHLA2RUH7 354 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 NAP1L6A6NFF2 107 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 LYRM9A8MSI8 78 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 F5H5P2 479 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 OR1I1O60431 355 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 CREBL2O60519 120 aaPredicted RBP2.99□□□□□ -1.93
YBX3-210ENST00000540975 PGLYRP1O75594 196 aaPredicted RBP2.99□□□□□ -1.93
YBX3-210ENST00000540975 REM1O75628 298 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 UBL3O95164 117 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 IGKV1D-16P01601 117 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 P01737 135 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 SLC35G6P0C7Q6 338 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 LINC00869P0C866 280 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 IGLC6P0CF74 106 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 GUCA1AP43080 201 aaPredicted RBP2.99□□□□□ -1.93
YBX3-210ENST00000540975 FABP6P51161 128 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 CAV3P56539 151 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 RPS23P62266 143 aaKnown RBP2.99□□□□□ -1.93
YBX3-210ENST00000540975 SNRPGP62308 76 aaKnown RBP2.99□□□□□ -1.93
YBX3-210ENST00000540975 CACNG7P62955 275 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 ERCC8Q13216 396 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 MMDQ15546 238 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 ZNF678Q5SXM1 525 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 SBSNQ6UWP8 590 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 TEX43Q6ZNM6 134 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 NTM-AS1Q6ZSK4 140 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 C10orf111Q8N326 155 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 ZFP41Q8N8Y5 198 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 ZDHHC22Q8N966 263 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 OR8B12Q8NGG6 310 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 C15orf40Q8WUR7 153 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 SMIM4Q8WVI0 70 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 SDF2Q99470 211 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 GPR21Q99679 349 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 DPY30Q9C005 99 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 FXYD6Q9H0Q3 95 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 PARP11Q9NR21 331 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 RPRMQ9NS64 109 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 UQCR10Q9UDW1 63 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 TMEM14AQ9Y6G1 99 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 GBF1Q92538 1859 aa2.99□□□□□ -1.93
YBX3-210ENST00000540975 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 TRAV26-2A0A0B4J265 109 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 IGHV5-10-1A0A0J9YXX1 117 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 ODAMA1E959 279 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 C5orf63A6NC05 138 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 MEIS3P1A6NDR6 274 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 ARRDC5A6NEK1 342 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 GGT3PA6NGU5 568 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 RIIAD1A6NNX1 92 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 NCBP2LA6PVI3 153 aaKnown RBP2.98□□□□□ -1.93
YBX3-210ENST00000540975 M0R129 80 aa2.98□□□□□ -1.93
YBX3-210ENST00000540975 OVOL1O14753 267 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms