RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 YPEL3P61236 119 aaPredicted RBP9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 RPL23P62829 140 aaKnown RBP9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 ZNF343Q6P1L6 599 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 Q6YL49 198 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 VN1R17PQ8TDU5 208 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 KLK15Q9H2R5 256 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 THYN1Q9P016 225 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 TLN2Q9Y4G6 2542 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 H3BRN7 92 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 PDE6DO43924 150 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 NDUFS6O75380 124 aaKnown RBP9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 RHEBQ15382 184 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 ELOVL1Q9BW60 279 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 PITPNC1Q9UKF7 332 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 F6UZH7 168 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 CLEC3BP05452 202 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 CRYBB3P26998 211 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 FCGR2BP31994 310 aaPredicted RBP9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 CFHR3Q02985 330 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 ADIRFQ15847 76 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 CLEC19AQ6UXS0 136 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 NECAP1Q8NC96 275 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 BLNKQ8WV28 456 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 TMEM68Q96MH6 324 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 DUX5Q96PT3 197 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 SHANK2-AS3Q9BTD1 123 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
AP003559.1-201ENST00000540906 TRAV30A0A087WSZ9 112 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 COLCA2A8K830 154 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 HOXA3O43365 443 aaPredicted RBP9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 TSPAN9O75954 239 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 OR2C1O95371 312 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 TRBV12-3P01733 135 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 SUMO1P63165 101 aaKnown RBP9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 TMEM241Q24JQ0 296 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 ZNF329Q86UD4 541 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 YPEL4Q96NS1 127 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 FOXC2Q99958 501 aa9.51□□□□□ -0.89
AP003559.1-201ENST00000540906 A0A1W2PRE2 83 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 PPP5D1E7EU14 171 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 M0QZK8 103 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 MRPS12O15235 138 aaKnown RBP9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 TRGV3P03979 118 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 HNF1AP20823 631 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 MYCNOSP40205 109 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 GNG5P63218 68 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 ZNF600Q6ZNG1 722 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 TXN2Q99757 166 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 SMCO4Q9NRQ5 59 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 ZNF586Q9NXT0 402 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 ARL2-SNX15V9GYD0 113 aa9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 SONP18583 2426 aaKnown RBP9.5□□□□□ -0.89
AP003559.1-201ENST00000540906 RNF212Q495C1 297 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 SIGLECL1Q8N7X8 197 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 Q8WTZ3 238 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 LINC00479Q96M42 142 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 TXNDC17Q9BRA2 123 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 PRDM13Q9H4Q3 707 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 VPREB3Q9UKI3 123 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 MYO9AB2RTY4 2548 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 ACANP16112 2415 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 OTOGQ6ZRI0 2925 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 ZNF98A6NK75 572 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 FABP1P07148 127 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 NBEAP1P0C6P0 100 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 RPL35P42766 123 aaKnown RBP9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 TPPP2P59282 170 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 RANP62826 216 aaKnown RBP9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 ATP5G2Q06055 141 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 TOMM20LQ6UXN7 152 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 LINC01551Q86U37 167 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
AP003559.1-201ENST00000540906 CLPSL1A2RUU4 121 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 K7EN84 100 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 AP4M1O00189 453 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 IGLV1-40P01703 118 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 RPL15P61313 204 aaKnown RBP9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 HIST1H2BAQ96A08 127 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 ZNF702PQ9H963 129 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 GNB4Q9HAV0 340 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
AP003559.1-201ENST00000540906 A0A087WWC5 75 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 SLC17A3O00476 420 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 TGOLN2O43493 480 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 Q71RC1 249 aaPredicted RBP9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 FAM24BQ8N5W8 94 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 OR5R1Q8NH85 324 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 TRAV34A0A0B4J273 112 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 FAM223BA6NKX1 122 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 ZNF207O43670 478 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms