RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 BCAP31P51572 246 aa12.43□□□□□ -0.42
CD9-209ENST00000540891 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
CD9-209ENST00000540891 Q6ZWC4 215 aa12.43□□□□□ -0.42
CD9-209ENST00000540891 BPIFCQ8NFQ6 507 aa12.43□□□□□ -0.42
CD9-209ENST00000540891 NRN1Q9NPD7 142 aa12.43□□□□□ -0.42
CD9-209ENST00000540891 MGAT4CQ9UBM8 478 aa12.43□□□□□ -0.42
CD9-209ENST00000540891 SLC45A2Q9UMX9 530 aa12.43□□□□□ -0.42
CD9-209ENST00000540891 UBE2CO00762 179 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 DEDDO75618 318 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 CST7O76096 145 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 ORM2P19652 201 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 CAV2P51636 162 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 SLC38A11Q08AI6 406 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 DEFB135Q30KP9 77 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 MUC7Q8TAX7 377 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 GGACTQ9BVM4 153 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 LYRM2Q9NU23 88 aaPredicted RBP12.42□□□□□ -0.42
CD9-209ENST00000540891 PFDN2Q9UHV9 154 aa12.42□□□□□ -0.42
CD9-209ENST00000540891 KMT2CQ8NEZ4 4911 aaKnown RBP12.41□□□□□ -0.42
CD9-209ENST00000540891 IGSF23A1L1A6 192 aa12.41□□□□□ -0.42
CD9-209ENST00000540891 PVALBP20472 110 aaPredicted RBP12.41□□□□□ -0.42
CD9-209ENST00000540891 PLP1P60201 277 aa12.41□□□□□ -0.42
CD9-209ENST00000540891 TMEM252Q8N6L7 170 aa12.41□□□□□ -0.42
CD9-209ENST00000540891 OR1B1Q8NGR6 318 aa12.41□□□□□ -0.42
CD9-209ENST00000540891 PPP1R14BQ96C90 147 aa12.41□□□□□ -0.42
CD9-209ENST00000540891 C17orf77Q96MU5 243 aa12.41□□□□□ -0.42
CD9-209ENST00000540891 SEPSECSQ9HD40 501 aaKnown RBP12.41□□□□□ -0.42
CD9-209ENST00000540891 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
CD9-209ENST00000540891 ZNF98A6NK75 572 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 KNCNA6PVL3 124 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 SOCS3O14543 225 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 LINC00869P0C866 280 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 H2BFSP57053 126 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 PSMG4Q5JS54 123 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 TEPPQ6URK8 271 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 RNF183Q96D59 192 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 NMES1Q9C002 83 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 CSTL1Q9H114 145 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 DOK5Q9P104 306 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 FBXL17Q9UF56 701 aa12.4□□□□□ -0.42
CD9-209ENST00000540891 H0YIZ8 118 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 C3orf84H3BNL1 204 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 H3BRN7 92 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 SPRY2O43597 315 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 SULT1A1P50225 295 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 SELENOTP62341 195 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 VWC2Q2TAL6 325 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
CD9-209ENST00000540891 OR8I2Q8N0Y5 310 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 MGST2Q99735 147 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 TMEM147Q9BVK8 224 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 SCRT1Q9BWW7 348 aa12.39□□□□□ -0.43
CD9-209ENST00000540891 AGPAT2O15120 278 aa12.38□□□□□ -0.43
CD9-209ENST00000540891 PATE2Q6UY27 113 aa12.38□□□□□ -0.43
CD9-209ENST00000540891 STHQ8IWL8 128 aa12.38□□□□□ -0.43
CD9-209ENST00000540891 SLC25A39Q9BZJ4 359 aaPredicted RBP12.38□□□□□ -0.43
CD9-209ENST00000540891 SLC25A22Q9H936 323 aa12.38□□□□□ -0.43
CD9-209ENST00000540891 OR5AC2Q9NZP5 309 aa12.38□□□□□ -0.43
CD9-209ENST00000540891 SSNA1O43805 119 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 HYPMO75409 117 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 PTTG1O95997 202 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 GIG44P09565 113 aaPredicted RBP12.37□□□□□ -0.43
CD9-209ENST00000540891 SNRPD3P62318 126 aaKnown RBP12.37□□□□□ -0.43
CD9-209ENST00000540891 LRRC37A5PQ49AS3 106 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 CASC10Q5T4H9 136 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 ZNF546Q86UE3 836 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 UHRF2Q96PU4 802 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 SHANK2-AS3Q9BTD1 123 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 HIGD1AQ9Y241 93 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 WDR83OSQ9Y284 106 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
CD9-209ENST00000540891 AGRNO00468 2067 aa12.36□□□□□ -0.43
CD9-209ENST00000540891 OR5G3P0C626 314 aa12.36□□□□□ -0.43
CD9-209ENST00000540891 S100A11P31949 105 aa12.36□□□□□ -0.43
CD9-209ENST00000540891 DEFB1P60022 68 aa12.36□□□□□ -0.43
CD9-209ENST00000540891 RAP2BP61225 183 aa12.36□□□□□ -0.43
CD9-209ENST00000540891 CYCSP99999 105 aaKnown RBP12.36□□□□□ -0.43
CD9-209ENST00000540891 ARL6Q9H0F7 186 aa12.36□□□□□ -0.43
CD9-209ENST00000540891 UQCC1Q9NVA1 299 aa12.36□□□□□ -0.43
CD9-209ENST00000540891 E5RGE8 158 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 CA1P00915 261 aaPredicted RBP12.35□□□□□ -0.43
CD9-209ENST00000540891 LYL1P12980 280 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 C4BPBP20851 252 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 GALR1P47211 349 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 PSMB3P49720 205 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 STX12Q86Y82 276 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 PPP1R1CQ8WVI7 109 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 ARV1Q9H2C2 271 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 ALG5Q9Y673 324 aa12.35□□□□□ -0.43
CD9-209ENST00000540891 UBE2L5PA0A1B0GUS4 154 aa12.34□□□□□ -0.43
CD9-209ENST00000540891 RLN2P04090 185 aa12.34□□□□□ -0.43
CD9-209ENST00000540891 CAMLGP49069 296 aa12.34□□□□□ -0.43
CD9-209ENST00000540891 HBG1P69891 147 aa12.34□□□□□ -0.43
CD9-209ENST00000540891 HBG2P69892 147 aa12.34□□□□□ -0.43
CD9-209ENST00000540891 PRR20EP86478 221 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms