RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 CRIP2P52943 208 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-204ENST00000540846 MFAP4P55083 255 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 KIAA0141Q14154 515 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-204ENST00000540846 C19orf54Q5BKX5 351 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 LINC00305Q7Z4B0 112 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 STXBP6Q8NFX7 210 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 OR5T1Q8NG75 326 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 ZNF418Q8TF45 676 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-204ENST00000540846 ZNF702PQ9H963 129 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 C21orf62Q9NYP8 219 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 TRAV30A0A087WSZ9 112 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 A0A1W2PRE2 83 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 COLCA2A8K830 154 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-204ENST00000540846 NDUFB8O95169 186 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 TOMM40O96008 361 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 OR10J4P0C629 311 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 FCGR2BP31994 310 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-204ENST00000540846 YPEL3P61236 119 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-204ENST00000540846 ECSCRQ19T08 205 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 UNQ5815/PRO19632Q6UWF5 114 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 Q8N2B8 174 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 VN1R17PQ8TDU5 208 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 C2CD3Q4AC94 2353 aa9.72□□□□□ -0.85
SMAD3-204ENST00000540846 FAM181BA6NEQ2 426 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 GNG7O60262 68 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 OR2J3O76001 311 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 NDUFB4O95168 129 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 RD3LP0DJH9 198 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 RPL23P62829 140 aaKnown RBP9.71□□□□□ -0.85
SMAD3-204ENST00000540846 FXYD5Q96DB9 178 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 YPEL4Q96NS1 127 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 TXN2Q99757 166 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 OR51M1Q9H341 326 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 FBXL7Q9UJT9 491 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 HIGD1AQ9Y241 93 aa9.71□□□□□ -0.85
SMAD3-204ENST00000540846 TRBV9A0A0B4J1U6 114 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 CXorf65A6NEN9 183 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 GGTLC3B5MD39 225 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 OR2C1O95371 312 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 IGF1P05019 195 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 PYYP10082 97 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 GP9P14770 177 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 LYZP61626 148 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 ADIRFQ15847 76 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 NPFFR1Q9GZQ6 430 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 TMEM242Q9NWH2 141 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 MRPL27Q9P0M9 148 aaKnown RBP9.71□□□□□ -0.86
SMAD3-204ENST00000540846 ZNF580Q9UK33 172 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 PRELID1Q9Y255 219 aa9.71□□□□□ -0.86
SMAD3-204ENST00000540846 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
SMAD3-204ENST00000540846 SETD2Q9BYW2 2564 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-204ENST00000540846 WI2-2373I1.2A0A1W2PRP0 233 aa9.7□□□□□ -0.86
SMAD3-204ENST00000540846 RPL15P61313 204 aaKnown RBP9.7□□□□□ -0.86
SMAD3-204ENST00000540846 TMEM95Q3KNT9 176 aa9.7□□□□□ -0.86
SMAD3-204ENST00000540846 HIST1H2BAQ96A08 127 aa9.7□□□□□ -0.86
SMAD3-204ENST00000540846 ISOC2Q96AB3 205 aa9.7□□□□□ -0.86
SMAD3-204ENST00000540846 CTDSP1Q9GZU7 261 aa9.7□□□□□ -0.86
SMAD3-204ENST00000540846 S4R3C0 116 aa9.7□□□□□ -0.86
SMAD3-204ENST00000540846 TRBV20OR9-2A0A075B6H5 130 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 G3V318 75 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 TCF21O43680 179 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 SCGB2A1O75556 95 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 MT-ND4LP03901 98 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 RHOGP84095 191 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 Q56UQ5 140 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 ZNF343Q6P1L6 599 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 Q6ZSV7 163 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 LINC01551Q86U37 167 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 ZNF491Q8N8L2 437 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 NECAP1Q8NC96 275 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 ZNF502Q8TBZ5 544 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 RNF125Q96EQ8 232 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 JMJD8Q96S16 334 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 SLC25A39Q9BZJ4 359 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-204ENST00000540846 TMEM14CQ9P0S9 112 aa9.69□□□□□ -0.86
SMAD3-204ENST00000540846 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 C9JCJ5 164 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 H3BRN7 92 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 IL4P05112 153 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 FOLR2P14207 255 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 ATF4P18848 351 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-204ENST00000540846 SRSF2Q01130 221 aaKnown RBP9.68□□□□□ -0.86
SMAD3-204ENST00000540846 CFHR3Q02985 330 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 C15orf32Q32M92 178 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 RNF212Q495C1 297 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 C9orf152Q5JTZ5 239 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 C2CD4CQ8TF44 421 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 NOL4LQ96MY1 436 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-204ENST00000540846 TCEAL7Q9BRU2 100 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 SHANK2-AS3Q9BTD1 123 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 PRSS22Q9GZN4 317 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 SERTAD4Q9NUC0 356 aa9.68□□□□□ -0.86
SMAD3-204ENST00000540846 CTSGP08311 255 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 PPIFP30405 207 aaKnown RBP9.67□□□□□ -0.86
SMAD3-204ENST00000540846 ELOVL1Q9BW60 279 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 LINC00527Q9UJ94 153 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms