RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 TRGV9Q99603 122 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 SLC35B3Q9H1N7 401 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 SAV1Q9H4B6 383 aaPredicted RBP10.39□□□□□ -0.75
MSRB3-209ENST00000540804 SEPSECSQ9HD40 501 aaKnown RBP10.39□□□□□ -0.75
MSRB3-209ENST00000540804 PLA2G2EQ9NZK7 142 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 FAT2Q9NYQ8 4349 aa10.39□□□□□ -0.75
MSRB3-209ENST00000540804 DEFB131BA0A096LNP1 70 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 SYNGR2O43760 224 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 ATP5IP56385 69 aaPredicted RBP10.38□□□□□ -0.75
MSRB3-209ENST00000540804 NUTF2P61970 127 aaKnown RBP10.38□□□□□ -0.75
MSRB3-209ENST00000540804 SPANXN5Q5MJ07 72 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 CENPSQ8N2Z9 138 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 ZNF709Q8N972 641 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 COQ8AQ8NI60 647 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 RBM38Q9H0Z9 239 aaKnown RBP10.38□□□□□ -0.75
MSRB3-209ENST00000540804 SLC25A32Q9H2D1 315 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 FLVCR2Q9UPI3 526 aa10.38□□□□□ -0.75
MSRB3-209ENST00000540804 DNAH17Q9UFH2 4485 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 LINC00854A0A1B0GVQ3 168 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
MSRB3-209ENST00000540804 SLC25A6P12236 298 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 S100A5P33763 92 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 PSMB3P49720 205 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 TCTAP57738 103 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 BAK1Q16611 211 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 C1orf194Q5T5A4 169 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
MSRB3-209ENST00000540804 FOXI2Q6ZQN5 318 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 OR8I2Q8N0Y5 310 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 SLC25A21Q9BQT8 299 aaPredicted RBP10.37□□□□□ -0.75
MSRB3-209ENST00000540804 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 SRRQ9GZT4 340 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 SLC25A22Q9H936 323 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 TMED3Q9Y3Q3 217 aa10.37□□□□□ -0.75
MSRB3-209ENST00000540804 ZNF705FA8MVS1 300 aaPredicted RBP10.36□□□□□ -0.75
MSRB3-209ENST00000540804 MED6O75586 246 aa10.36□□□□□ -0.75
MSRB3-209ENST00000540804 CCNKO75909 580 aa10.36□□□□□ -0.75
MSRB3-209ENST00000540804 ZNF705DP0CH99 300 aaPredicted RBP10.36□□□□□ -0.75
MSRB3-209ENST00000540804 ZNF705BP0CI00 300 aaPredicted RBP10.36□□□□□ -0.75
MSRB3-209ENST00000540804 ORM2P19652 201 aa10.36□□□□□ -0.75
MSRB3-209ENST00000540804 NUP62P37198 522 aaPredicted RBP10.36□□□□□ -0.75
MSRB3-209ENST00000540804 ID1P41134 155 aa10.36□□□□□ -0.75
MSRB3-209ENST00000540804 POLR2GP62487 172 aaKnown RBP eCLIP10.36□□□□□ -0.75
MSRB3-209ENST00000540804 FAM78BQ5VT40 261 aa10.36□□□□□ -0.75
MSRB3-209ENST00000540804 RSG1Q9BU20 258 aa10.36□□□□□ -0.75
MSRB3-209ENST00000540804 C9orf170A2RU37 121 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 FABP1P07148 127 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 ACOT7LQ6ZUV0 252 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 RNF126Q9BV68 326 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 DOK5Q9P104 306 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 PFDN2Q9UHV9 154 aa10.35□□□□□ -0.75
MSRB3-209ENST00000540804 A0A0J9YX75 114 aa10.34□□□□□ -0.75
MSRB3-209ENST00000540804 PRM2P04554 102 aa10.34□□□□□ -0.75
MSRB3-209ENST00000540804 PSG9Q00887 426 aa10.34□□□□□ -0.75
MSRB3-209ENST00000540804 AKR1C1Q04828 323 aa10.34□□□□□ -0.75
MSRB3-209ENST00000540804 OR1B1Q8NGR6 318 aa10.34□□□□□ -0.75
MSRB3-209ENST00000540804 CIB3Q96Q77 187 aaPredicted RBP10.34□□□□□ -0.75
MSRB3-209ENST00000540804 NEU1Q99519 415 aa10.34□□□□□ -0.75
MSRB3-209ENST00000540804 SDHCQ99643 169 aaPredicted RBP10.34□□□□□ -0.75
MSRB3-209ENST00000540804 STRAPQ9Y3F4 350 aaKnown RBP10.34□□□□□ -0.75
MSRB3-209ENST00000540804 TRAV8-2A0A0B4J237 113 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 ISLRO14498 428 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 NDUFB6O95139 128 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 AMBPP02760 352 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 ANXA7P20073 488 aaKnown RBP10.33□□□□□ -0.76
MSRB3-209ENST00000540804 PAX9P55771 341 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 RPP30P78346 268 aaKnown RBP10.33□□□□□ -0.76
MSRB3-209ENST00000540804 ID3Q02535 119 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 EBLN2Q6P2I7 272 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 RNF182Q8N6D2 247 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 PSENENQ9NZ42 101 aa10.33□□□□□ -0.76
MSRB3-209ENST00000540804 PIGBOS1A0A0B4J2F0 54 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 SSSCA1O60232 199 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 SPART-AS1P0CW21 52 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 BTCP35070 178 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 GALR1P47211 349 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 UBE2MP61081 183 aaKnown RBP10.32□□□□□ -0.76
MSRB3-209ENST00000540804 RRAS2P62070 204 aaPredicted RBP10.32□□□□□ -0.76
MSRB3-209ENST00000540804 FGL1Q08830 312 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 AMTNQ6UX39 209 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 BPIFCQ8NFQ6 507 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 OR4D5Q8NGN0 318 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 CLUHP3Q96NS8 147 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 TMEM147Q9BVK8 224 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 RPRMQ9NS64 109 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 DKK2Q9UBU2 259 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 RFNGQ9Y644 331 aa10.32□□□□□ -0.76
MSRB3-209ENST00000540804 KIAA1109Q2LD37 5005 aa10.31□□□□□ -0.76
MSRB3-209ENST00000540804 M0R2N4 97 aa10.31□□□□□ -0.76
MSRB3-209ENST00000540804 OR4E1P0C645 316 aa10.31□□□□□ -0.76
MSRB3-209ENST00000540804 HTN3P15516 51 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms