RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 BAALC-AS2P0C853 105 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 BRS3P32247 399 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 DYNLT3P51808 116 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 B2MP61769 119 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 DYNLT1P63172 113 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 CDK5R1Q15078 307 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 MSMO1Q15800 293 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 LTC4SQ16873 150 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 Q1T7F1 81 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 ESRGQ1W209 222 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 C22orf39Q6P5X5 142 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 ZNF826PQ6ZT77 177 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 CLECL1Q8IZS7 167 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 LINC00311Q8N616 119 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 C9orf163Q8N9P6 203 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.63□□□□□ -2.31
MDM2-227ENST00000540709 LINC00301Q8NCQ3 95 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 CANT1Q8WVQ1 401 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 ADAT3Q96EY9 351 aaPredicted RBP0.63□□□□□ -2.31
MDM2-227ENST00000540709 SLC25A21Q9BQT8 299 aaPredicted RBP0.63□□□□□ -2.31
MDM2-227ENST00000540709 ADAT1Q9BUB4 502 aaKnown RBP0.63□□□□□ -2.31
MDM2-227ENST00000540709 PBOV1Q9GZY1 135 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 MIXL1Q9H2W2 232 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 POPDC3Q9HBV1 291 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 LAMTOR3Q9UHA4 124 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 LHFPL6Q9Y693 200 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 LY96Q9Y6Y9 160 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 PTPRSQ13332 1948 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 GREB1Q4ZG55 1949 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 TOPBP1Q92547 1522 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 RIC1Q4ADV7 1423 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 DOCK3Q8IZD9 2030 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 ROCK1Q13464 1354 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 TONSLQ96HA7 1378 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 IGKV1-9A0A0C4DH69 117 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 TSTD3H0UI37 97 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 GGCTO75223 188 aaKnown RBP0.62□□□□□ -2.31
MDM2-227ENST00000540709 CST7O76096 145 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 MT-ND6P03923 174 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 TRGC2P03986 189 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 CLPSP04118 112 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 IFNA4P05014 189 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 CSN2P05814 226 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 HLA-EP13747 358 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 SSR2P43308 183 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 INSL3P51460 131 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 ARPP19P56211 112 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 RAB4BP61018 213 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 SURF2Q15527 256 aaPredicted RBP0.62□□□□□ -2.31
MDM2-227ENST00000540709 RTL8BQ17RB0 113 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 FKBP1CQ5VVH2 108 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 TEX261Q6UWH6 196 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 AKAP14Q86UN6 197 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 ANGPTL5Q86XS5 388 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 OR10K1Q8NGX5 313 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 TMEM254Q8TBM7 123 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 TEX47Q8TBZ9 253 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 SFT2D1Q8WV19 159 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 BORCS8Q96FH0 119 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 GPX7Q96SL4 187 aaPredicted RBP0.62□□□□□ -2.31
MDM2-227ENST00000540709 RTL8AQ9BWD3 113 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 REG4Q9BYZ8 158 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 TMEM133Q9H2Q1 129 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 SNURFQ9Y675 71 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 U3KQ87 197 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 SETD5Q9C0A6 1442 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 REREQ9P2R6 1566 aa0.62□□□□□ -2.31
MDM2-227ENST00000540709 ECM29Q5VYK3 1845 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 NEO1Q92859 1461 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 WDR90Q96KV7 1748 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 PTPRBP23467 1997 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 CPAMD8Q8IZJ3 1885 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 A0A1W2PRE2 83 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 TLCD2A6NGC4 264 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 CCDC160A6NGH7 325 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 OR2T8A6NH00 312 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 C2orf70A6NJV1 201 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 A8MWV9 139 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 E7EQ34 232 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 C19orf84I3L1E1 186 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 K7ERJ3 54 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 M0R233 179 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 RER1O15258 196 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 OR1I1O60431 355 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 LYZL6O75951 148 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 CD2P06729 351 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 FABP2P12104 132 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 RNASE4P34096 147 aaKnown RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 ZNF93P35789 620 aaPredicted RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 NDUFA6P56556 154 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 TFAMQ00059 246 aaKnown RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 CDK6Q00534 326 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 TMEM128Q5BJH2 165 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 C1orf140Q5VVS0 124 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 SAMD13Q5VXD3 122 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 TAC4Q86UU9 113 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 C12orf29Q8N999 325 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 C15orf53Q8NAA6 179 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 TMEM35BQ8NCS4 154 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 ST6GALNAC3Q8NDV1 305 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms